Non-Coding RNA Search

Ss1.1-rgul0101_i8.5

Sequence:


               
               GGAAATCTTTTCTAGAAATTCATACCTTACTATTCACCAGAGAACTCACACAGGGGAGAA
AGCTTTCATGTGTAAAAAGTGTGAGAACACTTTCTACCATAAGTCAGACTATACAATACA
TAAGAGAACACACAGAGGGGAGAAGTCTTATCACTGTGATCAGTGTGGGAAAACTTGCAC
TTGCAGTTCAGTCCTCAGATCACATCAGAGAACTCACACAGGGGAGAAGCCCTATGAATG
TAATGAGTGTGGGAAGTCTTTCTCTGAGAAGTCCGTCCTCACTGTACATCAGAGAATACA
CACAGGGGAGAAACCTTATAAGTGTAATGAGTGTGGGAAGCCCTTCTATCATAAGTCAGA
TCTCACTAAACATCAGAGAACACACACAGGGGAGAAACCCTATGAATGTAGTCATTGTGG
GAAAACCTTTAGTTGCAACTCAGGTCTCAAAGTACATCAGAGAAGACACATAAGGGAGAA
ACCCTATGAATGTAGTCATTGTAGGAAAACCTCTAAGAAATCAGTTCTCACAGTACATTC
AAAATTACACACAGGAGAAAAAATCTTATAAATAGAGCAATGAGAGAAATCTTTAGCGAT
TCATACCTTGAAATACTGTGGAGAATTCATACAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAATCTTTTCTAGAAATTCATACCTTACTATTCACCAGAGAACTCACACAGGGGAGAA
AGCTTTCATGTGTAAAAAGTGTGAGAACACTTTCTACCATAAGTCAGACTATACAATACA
TAAGAGAACACACAGAGGGGAGAAGTCTTATCACTGTGATCAGTGTGGGAAAACTTGCAC
TTGCAGTTCAGTCCTCAGATCACATCAGAGAACTCACACAGGGGAGAAGCCCTATGAATG
TAATGAGTGTGGGAAGTCTTTCTCTGAGAAGTCCGTCCTCACTGTACATCAGAGAATACA
CACAGGGGAGAAACCTTATAAGTGTAATGAGTGTGGGAAGCCCTTCTATCATAAGTCAGA
TCTCACTAAACATCAGAGAACACACACAGGGGAGAAACCCTATGAATGTAGTCATTGTGG
GAAAACCTTTAGTTGCAACTCAGGTCTCAAAGTACATCAGAGAAGACACATAAGGGAGAA
ACCCTATGAATGTAGTCATTGTAGGAAAACCTCTAAGAAATCAGTTCTCACAGTACATTC
AAAATTACACACAGGAGAAAAAATCTTATAAATAGAGCAATGAGAGAAATCTTTAGCGAT
TCATACCTTGAAATACTGTGGAGAATTCATACAGGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|13506753|gb|AAK28319.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|13506753|gb|AAK28319.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               24-636, gnl|bosTau2|chr10 (8996710-8996091)
               

               
               24-636, gnl|Hg17|chr19 (42818515-42817812)
               

               
               24-636, gnl|Mm7|chr2 (127310141-127309606)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               24-636, gnl|bosTau2|chr10 (8996710-8996091)
               

               
               24-636, gnl|Hg17|chr19 (42818515-42817812)
               

               
               24-636, gnl|Mm7|chr2 (127310141-127309606)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               gul (0.177588)
               

               
               spl (0.143184)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               spl (0.143184)

	24-636, gnl\|bosTau2\|chr10 (8996710-8996091)
	24-636, gnl\|Hg17\|chr19 (42818515-42817812)
	24-636, gnl\|Mm7\|chr2 (127310141-127309606)