Non-Coding RNA Search

Ss1.1-rgul0107_n19.5

Sequence:


               
               GTGAAAGCTTAGCTTTGAATAAAATGTATCTGCAATGAAGTGTTCATTTTTTTCTACATT
TTATTAAAACCTGCTTTATACTTTTGACTGCTTATAGGCACAGCTTCTGAGAGTTTAAAT
ATTTGAGCTTTAAAAATAAATATACACATGCTCAGTTTTGTAAGTAAACCTGTAAAATAC
CCAGAAAAGCAAACGTGTTGTTTAATTAGCACTAGGATTTTACAGTATGATGCTTGGTGT
TTTTGAGGAGTTATTAACATGAAAGTGAATCACAGGCTTTGCGGAAAATGCTGTTACTAC
TCAGCATAGGCTGGGTGAAGTAACTTGCCCAAAAAGCAAATATTAAAGAACTTCCTGATT
CTAGAATCACATTACGTGCATTAAACTATATGCATGAAAGTTCTCTGCATGGATTAATAG
GGACTAATCTTGTGGCACTCAGCTGAGGTCTATCCAGGCCTGCCACTATTGGCTACCTAC
CCTCATGAATATTCCACTTTAAAAAAACTTGAGAGTCTACCATATGTACCTGTAAGAAAG
GAGAAAACTTTTCCCCCCATTTTTAAGGTGTGTGTTGAGGGGGGAGAGCTCTGTATTTCT
GTTTGGACACAGTGTAATTTAATTTTCTGGCCAGCAGGTCCCCCATGTAGATATCACTTT
GAGACTTAGAGTATATACTCTTAGCTTAAAATGTTATTTTCTGCCATCATTTCCAGATAT
GTTCTTCACTGTTAAGTTCTAAATCTTAAAATGTTAGTATGGAATACCAACAATTTTCTT
TTTGATTACTATTATATGTATTCTAATAGGAAAATAGTGTGGGTTTTTTTGCCCAAGAGC
ATCAGGTTATTGATGGAAATGGATCATTTTTTCAATTGTTCATAGTGTGTTCAATCAATC
CAGTGAACTACCATATGCATAAATGAGTGAAGCTGTCTAATTGGAACTGCAATTATTTAT
CTGCTTAGAGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGAAAGCTTAGCTTTGAATAAAATGTATCTGCAATGAAGTGTTCATTTTTTTCTACATT
TTATTAAAACCTGCTTTATACTTTTGACTGCTTATAGGCACAGCTTCTGAGAGTTTAAAT
ATTTGAGCTTTAAAAATAAATATACACATGCTCAGTTTTGTAAGTAAACCTGTAAAATAC
CCAGAAAAGCAAACGTGTTGTTTAATTAGCACTAGGATTTTACAGTATGATGCTTGGTGT
TTTTGAGGAGTTATTAACATGAAAGTGAATCACAGGCTTTGCGGAAAATGCTGTTACTAC
TCAGCATAGGCTGGGTGAAGTAACTTGCCCAAAAAGCAAATATTAAAGAACTTCCTGATT
CTAGAATCACATTACGTGCATTAAACTATATGCATGAAAGTTCTCTGCATGGATTAATAG
GGACTAATCTTGTGGCACTCAGCTGAGGTCTATCCAGGCCTGCCACTATTGGCTACCTAC
CCTCATGAATATTCCACTTTAAAAAAACTTGAGAGTCTACCATATGTACCTGTAAGAAAG
GAGAAAACTTTTCCCCCCATTTTTAAGGTGTGTGTTGAGGGGGGAGAGCTCTGTATTTCT
GTTTGGACACAGTGTAATTTAATTTTCTGGCCAGCAGGTCCCCCATGTAGATATCACTTT
GAGACTTAGAGTATATACTCTTAGCTTAAAATGTTATTTTCTGCCATCATTTCCAGATAT
GTTCTTCACTGTTAAGTTCTAAATCTTAAAATGTTAGTATGGAATACCAACAATTTTCTT
TTTGATTACTATTATATGTATTCTAATAGGAAAATAGTGTGGGTTTTTTTGCCCAAGAGC
ATCAGGTTATTGATGGAAATGGATCATTTTTTCAATTGTTCATAGTGTGTTCAATCAATC
CAGTGAACTACCATATGCATAAATGAGTGAAGCTGTCTAATTGGAACTGCAATTATTTAT
CTGCTTAGAGTA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               5-777, gnl|bosTau2|chr1 (70637164-70637930)
               

               
               5-777, gnl|Hg17|chr3 (157738065-157738878)
               

               
               5-777, gnl|Mm7|chr3 (65478320-65479126)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-777, gnl|bosTau2|chr1 (70637164-70637930)
               

               
               5-777, gnl|Hg17|chr3 (157738065-157738878)
               

               
               5-777, gnl|Mm7|chr3 (65478320-65479126)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               gul (0.177588)
               

               
               ret (0.128733)
               

               
               thg (0.126791)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               ret (0.128733)
               

               
               thg (0.126791)

	5-777, gnl\|bosTau2\|chr1 (70637164-70637930)
	5-777, gnl\|Hg17\|chr3 (157738065-157738878)
	5-777, gnl\|Mm7\|chr3 (65478320-65479126)