Non-Coding RNA Search

Ss1.1-rgul0110_k4.5

Sequence:


               
               ATGGTATAATGAGTGACCAGAGTTTTCAAGAGTATAGGACTAGGCTTAAATTCCAGCTCT
GCAGTCTTGGGCAAGTTGCCTGACTTCTCTGAGATTATTTTTTTCTTCTGTAAAATGGAA
GAATAATACCTACTTTGGGGGATATTGGCACAATTAAAAATGATTTGTGTAGTGTGCCTA
GCTCACTGTCTGATAATTAATAGATATTAATTATCTATTAAATGGTAGCATTTTATACTA
TTGATGTCCTTGTGAAATATGAAAGGACTATAAATTCTTCCTCTTGCAGATAAGAAAATG
AAAAAACAATATGAACATATAAATCAGCTGTTCAGAATCAAGCCAAAGTTTTCTGCATCA
ACTTTTCTTTATCATATACATGTATATAAATGCATAGGTTAAGGAAATAGGAACCTGAAA
CTGTGGAATACTACAGAATATAACCTATTTTATGTTTTGATGAACGCTATCACATTTTTT
TTGGTGCATTATTTGCCCATTACATTTTAGTAACACCTTTGCTGAGTCTTCTTGTTATAA
AACATTCAAATTCTGATGTACGTTATTGAAAAATGAGGAGTAACTCAGAAATAAAGCTTA
ATGATATAATCAAGCAGATATGAGAAATATTTTTGAAAGAAATTAGAAGATTTAAAGGGG
GATTAGTGAAATTAATGCAACTGGTAACATGCTGTAATCATATAGTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGGTATAATGAGTGACCAGAGTTTTCAAGAGTATAGGACTAGGCTTAAATTCCAGCTCT
GCAGTCTTGGGCAAGTTGCCTGACTTCTCTGAGATTATTTTTTTCTTCTGTAAAATGGAA
GAATAATACCTACTTTGGGGGATATTGGCACAATTAAAAATGATTTGTGTAGTGTGCCTA
GCTCACTGTCTGATAATTAATAGATATTAATTATCTATTAAATGGTAGCATTTTATACTA
TTGATGTCCTTGTGAAATATGAAAGGACTATAAATTCTTCCTCTTGCAGATAAGAAAATG
AAAAAACAATATGAACATATAAATCAGCTGTTCAGAATCAAGCCAAAGTTTTCTGCATCA
ACTTTTCTTTATCATATACATGTATATAAATGCATAGGTTAAGGAAATAGGAACCTGAAA
CTGTGGAATACTACAGAATATAACCTATTTTATGTTTTGATGAACGCTATCACATTTTTT
TTGGTGCATTATTTGCCCATTACATTTTAGTAACACCTTTGCTGAGTCTTCTTGTTATAA
AACATTCAAATTCTGATGTACGTTATTGAAAAATGAGGAGTAACTCAGAAATAAAGCTTA
ATGATATAATCAAGCAGATATGAGAAATATTTTTGAAAGAAATTAGAAGATTTAAAGGGG
GATTAGTGAAATTAATGCAACTGGTAACATGCTGTAATCATATAGTAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               19-708, gnl|bosTau2|chr2 (13139129-13139787)
               

               
               19-708, gnl|Hg17|chr2 (176618700-176618055)
               

               
               19-708, gnl|Mm7|chr2 (74364476-74363632)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               19-708, gnl|bosTau2|chr2 (13139129-13139787)
               

               
               19-708, gnl|Hg17|chr2 (176618700-176618055)
               

               
               19-708, gnl|Mm7|chr2 (74364476-74363632)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               gul (0.177588)
               

               
               mga (0.160205)
               

               
               fco (0.157208)
               

               
               lin (0.145603)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               mga (0.160205)
               

               
               fco (0.157208)
               

               
               lin (0.145603)

	19-708, gnl\|bosTau2\|chr2 (13139129-13139787)
	19-708, gnl\|Hg17\|chr2 (176618700-176618055)
	19-708, gnl\|Mm7\|chr2 (74364476-74363632)