Ss1.1-rgul0117_d6.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGATCGAATTGAATCCTCGGCATGTGTATCCAAGTGTGGAAACTTCATTGTAGTGGGCTG TTACAATGGCTTAGTTTATGTTCTAAAAAGTGACAGTGGAGAAAAATACTGGATGTTTAC TACTGAGGACGCTGTGAAGAGCTCAGCAACCATGGATCCAACCACAGGACTTTTTTACAT TGGATCTCATGACCAGCATGCATATGCTTTGGATATTTATAAAAAGAAGTGTGTTTGGAA GTTGAAATGCAAAGGAACTGTTTTTTCTTCTCCTTGTTTGAGCCTCATTCCACATCATTT GTATTTTGCTACACTGGGAGGACTTTTACTGGCTATAAATCCTGCCACTGGGAACAGAGT CTGGAAGCATCACTGTGGAAAGCCACTCTTCTCTTCTCCACGGTGCTGCCTACAATATGT TTGCATTGGCTGTGTAGACGGGAATTTACTTTGCTTTACGCACTTTGGAGAACAGGTTTG GCAGTTCTCTACCAGTGAACCGATCTTTTCATCTCCATGTACCTCAGCATCAGAGCAAGA AATATTTTTTGGTTCCCATGATTGCTTTATCTACTGCTGTAACATGAAAGGTCAACTCCG ATGGAAATTTCAAACTACTTCAACGGTGTATTCAACACCATTTGCCTTCCGTAACCACAC GTGCAGCAGTGAAGCATGGCTGGCAGCAGCATCTACTGATGGGAAATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGATCGAATTGAATCCTCGGCATGTGTATCCAAGTGTGGAAACTTCATTGTAGTGGGCTG TTACAATGGCTTAGTTTATGTTCTAAAAAGTGACAGTGGAGAAAAATACTGGATGTTTAC TACTGAGGACGCTGTGAAGAGCTCAGCAACCATGGATCCAACCACAGGACTTTTTTACAT TGGATCTCATGACCAGCATGCATATGCTTTGGATATTTATAAAAAGAAGTGTGTTTGGAA GTTGAAATGCAAAGGAACTGTTTTTTCTTCTCCTTGTTTGAGCCTCATTCCACATCATTT GTATTTTGCTACACTGGGAGGACTTTTACTGGCTATAAATCCTGCCACTGGGAACAGAGT CTGGAAGCATCACTGTGGAAAGCCACTCTTCTCTTCTCCACGGTGCTGCCTACAATATGT TTGCATTGGCTGTGTAGACGGGAATTTACTTTGCTTTACGCACTTTGGAGAACAGGTTTG GCAGTTCTCTACCAGTGAACCGATCTTTTCATCTCCATGTACCTCAGCATCAGAGCAAGA AATATTTTTTGGTTCCCATGATTGCTTTATCTACTGCTGTAACATGAAAGGTCAACTCCG ATGGAAATTTCAAACTACTTCAACGGTGTATTCAACACCATTTGCCTTCCGTAACCACAC GTGCAGCAGTGAAGCATGGCTGGCAGCAGCATCTACTGATGGGAAATT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 56-237, gnl|bosTau2|chr6 (35408999-35409179) | |
| 56-237, gnl|Hg17|chr4 (57052385-57052017) | |
| 56-237, gnl|Mm7|chr5 (76811598-76811418) | |
| 473-706, gnl|bosTau2|chr6 (35413160-35413393) | |
| 473-706, gnl|canFam2|chr13 (51507742-51508153) | |
| 473-706, gnl|danRer3|chr20 (27051994-27052466) | |
| 473-706, gnl|dasNov1|scaffold_18888 (7182-7595) | |
| 473-706, gnl|echTel1|scaffold_296170 (45543-45957) | |
| 473-706, gnl|fr1|chrUn (154223301-154223721) | |
| 473-706, gnl|galGal2|chr4 (65285273-65284847) | |
| 473-706, gnl|hg17|chr4 (57045478-57045891) | |
| 473-706, gnl|Hg17|chr4 (57045890-57045655) | |
| 473-706, gnl|loxAfr1|scaffold_7308 (41152-41565) | |
| 473-706, gnl|mm7|chr5 (76807540-76807952) | |
| 473-706, gnl|Mm7|chr5 (76807949-76807716) | |
| 473-706, gnl|monDom2|scaffold_26 (20151939-20152385) | |
| 473-706, gnl|oryCun1|scaffold_191191 (108118-107707) | |
| 473-706, gnl|panTro1|chr3 (89587852-89587439) | |
| 473-706, gnl|rn3|chr14 (33575343-33574931) | |
| 473-706, gnl|tetNig1|chr1_random (2184919-2185337) | |
| 473-706, gnl|xenTro1|scaffold_401 (6456-6864) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 56-237, gnl|bosTau2|chr6 (35408999-35409179) | |
| 56-237, gnl|Hg17|chr4 (57052385-57052017) | |
| 56-237, gnl|Mm7|chr5 (76811598-76811418) | |
| 473-706, gnl|bosTau2|chr6 (35413160-35413393) | |
| 473-706, gnl|canFam2|chr13 (51507742-51508153) | |
| 473-706, gnl|danRer3|chr20 (27051994-27052466) | |
| 473-706, gnl|dasNov1|scaffold_18888 (7182-7595) | |
| 473-706, gnl|echTel1|scaffold_296170 (45543-45957) | |
| 473-706, gnl|fr1|chrUn (154223301-154223721) | |
| 473-706, gnl|galGal2|chr4 (65285273-65284847) | |
| 473-706, gnl|hg17|chr4 (57045478-57045891) | |
| 473-706, gnl|Hg17|chr4 (57045890-57045655) | |
| 473-706, gnl|loxAfr1|scaffold_7308 (41152-41565) | |
| 473-706, gnl|mm7|chr5 (76807540-76807952) | |
| 473-706, gnl|Mm7|chr5 (76807949-76807716) | |
| 473-706, gnl|monDom2|scaffold_26 (20151939-20152385) | |
| 473-706, gnl|oryCun1|scaffold_191191 (108118-107707) | |
| 473-706, gnl|panTro1|chr3 (89587852-89587439) | |
| 473-706, gnl|rn3|chr14 (33575343-33574931) | |
| 473-706, gnl|tetNig1|chr1_random (2184919-2185337) | |
| 473-706, gnl|xenTro1|scaffold_401 (6456-6864) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| gul (0.177588) | |
| ski (0.146735) | |
| spl (0.143184) | |
| ldo (0.0970026) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| gul (0.177588) | |
| ski (0.146735) | |
| spl (0.143184) | |
| ldo (0.0970026) |