Ss1.1-rgul0118_d22.5
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ATTCAAGGGCCTAAAATAAGTTGCACTGATATGAGAATGCACAAAGGGTTATGTCACTAG
ATTTGAAATGTGGAAATGGTTTCTCACAAATTAGGTCAAAGGAAAAGCTTGTTTTTCACC
CTTGACTCCATCCTTTTGGCTTTGGTTTGAAGATTGGTGTTGAGATCTGTACTTTTGTAA
TCAGACCACCAAGCAAGCTTTACTTATGTCTGGGCAGAGAGGGAAAGTGTCAGGTTTCAT
TTTGGTTTTACCACTAATAAAAAAGTTAGTATTCTCAAAAATAGAGATATTACCAGCTTT
GTACTCAAGAGCCTATGCTTGGAATTGGGCGCCCCCTACCCCTACCCCCCACAGCACACA
GTTAATCTTGGTGGATTTGTATTGAGGCATCCACATTTCAGCCACTTAGTGGGTCAACAC
TGATTTCATTCAACAAGCATTTTATGGTGCTGGGGATACAAAGTTCAAGAAGATACAGTC
TCTGACCTCAAAAGATTTTCATACTGGTATGGGATGAACTGACGGTTAATAGTTTAGTGT
AATAAATGCTATAAATGGGTACACATTTCAGATTTAGGGCAGAGACAACTGGTTGGTATA
GGTTGTGGCCCTAGAATAAGGGGGGTGACAAATTGGTTCATGTGTAGGTAGAAAAGACCT
GTGACCTTGGATGAACTGAGCTAACTGGCCATAGAGAGACCACAGCAAAGGCTTGCTTTA
TTCCAGAAAATAAAGGTAACCGAGGGTAGTCAGGAATACTGTCTGAGAGAGAAAACAACA
GGTGAGTGAGTGGGGGTTGAGAACCCTTGGTTTTGGTCCCCATTGTAGGCTCTTTGCCCA
AGTGTTTAATGTTTTAGTTAATCCTTGCTTGTGGAAAGTATTAACTATGTTGCAGATCCA
GTTATGTATTGTTACCTTATTGTATGAGTTGTTCATACCTTTTTCAGTTTCTCATCCCTT
TTGAAGGAATTAACATGAAGCAGGCTTGAAGCCTAAAACAGGGACATATTCCAATGACAA
AAAGATTTGCTAAAAAAAAAAAGCATCTTAGGGCACATCTGGTAACACCTGGGCATCTAT
TCTGGGCAGTATAGTTTTACTTAACCACTGCAGGATGGTGATTTCTAAGCAGAGACTTGC
ATCAATTATGTGAAAACCTCTCCCAAAAATACTTATGCCCTGGAGTTTTGGATTTAATCA
ATCTAGGGAGGTCCAGGGTGAGGCCTAGCCCTGTTAGGAAGAGTCTGAGCTTAAGAAATG
TCTTAGTTCTGACCATGCGACCATGGGAAAAATGATACTTTTCTCTGCCTGGGTAATTGA
GAAGTGGGTAATTGAAAGTTGACTAGATTTGGAAGCCAGAATTCCCAAGAATTAGAATAA
CTGTTTTAGAAAATTAAAGAGTGATGGTTCTTTGGATAGCTCCATAAAAATTTCTAGTTT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATTCAAGGGCCTAAAATAAGTTGCACTGATATGAGAATGCACAAAGGGTTATGTCACTAG
ATTTGAAATGTGGAAATGGTTTCTCACAAATTAGGTCAAAGGAAAAGCTTGTTTTTCACC
CTTGACTCCATCCTTTTGGCTTTGGTTTGAAGATTGGTGTTGAGATCTGTACTTTTGTAA
TCAGACCACCAAGCAAGCTTTACTTATGTCTGGGCAGAGAGGGAAAGTGTCAGGTTTCAT
TTTGGTTTTACCACTAATAAAAAAGTTAGTATTCTCAAAAATAGAGATATTACCAGCTTT
GTACTCAAGAGCCTATGCTTGGAATTGGGCGCCCCCTACCCCTACCCCCCACAGCACACA
GTTAATCTTGGTGGATTTGTATTGAGGCATCCACATTTCAGCCACTTAGTGGGTCAACAC
TGATTTCATTCAACAAGCATTTTATGGTGCTGGGGATACAAAGTTCAAGAAGATACAGTC
TCTGACCTCAAAAGATTTTCATACTGGTATGGGATGAACTGACGGTTAATAGTTTAGTGT
AATAAATGCTATAAATGGGTACACATTTCAGATTTAGGGCAGAGACAACTGGTTGGTATA
GGTTGTGGCCCTAGAATAAGGGGGGTGACAAATTGGTTCATGTGTAGGTAGAAAAGACCT
GTGACCTTGGATGAACTGAGCTAACTGGCCATAGAGAGACCACAGCAAAGGCTTGCTTTA
TTCCAGAAAATAAAGGTAACCGAGGGTAGTCAGGAATACTGTCTGAGAGAGAAAACAACA
GGTGAGTGAGTGGGGGTTGAGAACCCTTGGTTTTGGTCCCCATTGTAGGCTCTTTGCCCA
AGTGTTTAATGTTTTAGTTAATCCTTGCTTGTGGAAAGTATTAACTATGTTGCAGATCCA
GTTATGTATTGTTACCTTATTGTATGAGTTGTTCATACCTTTTTCAGTTTCTCATCCCTT
TTGAAGGAATTAACATGAAGCAGGCTTGAAGCCTAAAACAGGGACATATTCCAATGACAA
AAAGATTTGCTAAAAAAAAAAAGCATCTTAGGGCACATCTGGTAACACCTGGGCATCTAT
TCTGGGCAGTATAGTTTTACTTAACCACTGCAGGATGGTGATTTCTAAGCAGAGACTTGC
ATCAATTATGTGAAAACCTCTCCCAAAAATACTTATGCCCTGGAGTTTTGGATTTAATCA
ATCTAGGGAGGTCCAGGGTGAGGCCTAGCCCTGTTAGGAAGAGTCTGAGCTTAAGAAATG
TCTTAGTTCTGACCATGCGACCATGGGAAAAATGATACTTTTCTCTGCCTGGGTAATTGA
GAAGTGGGTAATTGAAAGTTGACTAGATTTGGAAGCCAGAATTCCCAAGAATTAGAATAA
CTGTTTTAGAAAATTAAAGAGTGATGGTTCTTTGGATAGCTCCATAAAAATTTCTAGTTT |
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1-506, gnl|bosTau2|chr5 (16566661-16567181) |
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1-506, gnl|Hg17|chr12 (52916828-52916353) |
| |
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535-924, gnl|bosTau2|chr5 (16567187-16567558) |
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535-924, gnl|canFam2|chr27 (4054958-4054490) |
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535-924, gnl|echTel1|scaffold_322533 (64516-64910) |
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535-924, gnl|hg17|chr12 (52915709-52916157) |
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535-924, gnl|Hg17|chr12 (52916347-52915911) |
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535-924, gnl|loxAfr1|scaffold_1845 (11760-12207) |
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535-924, gnl|mm7|chr15 (103182945-103183292) |
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535-924, gnl|oryCun1|scaffold_203643 (198897-198473) |
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535-924, gnl|panTro1|chr10 (54171289-54171736) |
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535-924, gnl|rheMac2|chr11 (51337993-51338435) |
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535-924, gnl|rn3|chr7 (142183856-142184188) |
| |
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926-1344, gnl|bosTau2|chr5 (16567590-16568005) |
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926-1344, gnl|Hg17|chr12 (52915872-52915120) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-506, gnl|bosTau2|chr5 (16566661-16567181) |
|
1-506, gnl|Hg17|chr12 (52916828-52916353) |
| |
|
535-924, gnl|bosTau2|chr5 (16567187-16567558) |
|
535-924, gnl|canFam2|chr27 (4054958-4054490) |
|
535-924, gnl|echTel1|scaffold_322533 (64516-64910) |
|
535-924, gnl|hg17|chr12 (52915709-52916157) |
|
535-924, gnl|Hg17|chr12 (52916347-52915911) |
|
535-924, gnl|loxAfr1|scaffold_1845 (11760-12207) |
|
535-924, gnl|mm7|chr15 (103182945-103183292) |
|
535-924, gnl|oryCun1|scaffold_203643 (198897-198473) |
|
535-924, gnl|panTro1|chr10 (54171289-54171736) |
|
535-924, gnl|rheMac2|chr11 (51337993-51338435) |
|
535-924, gnl|rn3|chr7 (142183856-142184188) |
| |
|
926-1344, gnl|bosTau2|chr5 (16567590-16568005) |
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926-1344, gnl|Hg17|chr12 (52915872-52915120) |
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gul (0.177588) |
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pty (0.142714) |
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gul (0.177588) |
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pty (0.142714) |
