Non-Coding RNA Search

Ss1.1-rgul0120_d11.5

Sequence:


               
               GCCCTGGCAGGCCCTGGGCCAGGCTCCTTAGCTTTTACGCAAAGGGGCCAAACAGGATGA
GAGCAGGATGGAAACTGTATATCATAGGAACCCAGAGGGGCAGGAAGTCACAACATAAGA
AGGAATTCTTGATTAAAAGTATAATTGGAAAGGTTTGTGCTGGGAGGAGGGGAGAGAATG
GCACTAAAATATGTCTACCTTGTGTACATGTGTGTAGGGAAAAAAAACCCATTAGCCCAC
CTTTTCTTCAGTTCTGTTTCTCTTGTCATAATTATTCTCCACTTTGGAGAAATTGGAAGT
ATTTTTTCTACGTGAAGATTCTGTGCTAAGTGTGTTCGGGAGAAAAGACCACCAAACTTC
ATTCATCCTTCTCATTATTATTTTCTATGGAAGAAACTGAATCCTTTGTAGAATAAAGTA
TTCTGGAATTTATATTTAGGAGACCGAAGACAAGCGTGGGTAGAGGTCACAGTCGCTATT
CACAATGCTTTTTTTCTACATGCTGTTCTCTAAGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCTGGCAGGCCCTGGGCCAGGCTCCTTAGCTTTTACGCAAAGGGGCCAAACAGGATGA
GAGCAGGATGGAAACTGTATATCATAGGAACCCAGAGGGGCAGGAAGTCACAACATAAGA
AGGAATTCTTGATTAAAAGTATAATTGGAAAGGTTTGTGCTGGGAGGAGGGGAGAGAATG
GCACTAAAATATGTCTACCTTGTGTACATGTGTGTAGGGAAAAAAAACCCATTAGCCCAC
CTTTTCTTCAGTTCTGTTTCTCTTGTCATAATTATTCTCCACTTTGGAGAAATTGGAAGT
ATTTTTTCTACGTGAAGATTCTGTGCTAAGTGTGTTCGGGAGAAAAGACCACCAAACTTC
ATTCATCCTTCTCATTATTATTTTCTATGGAAGAAACTGAATCCTTTGTAGAATAAAGTA
TTCTGGAATTTATATTTAGGAGACCGAAGACAAGCGTGGGTAGAGGTCACAGTCGCTATT
CACAATGCTTTTTTTCTACATGCTGTTCTCTAAGCG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-493, gnl|bosTau2|chr13 (10520191-10519693)
               

               
               1-493, gnl|Hg17|chr10 (33631326-33630791)
               

               
               1-493, gnl|Mm7|chr8 (126996002-126996452)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-493, gnl|bosTau2|chr13 (10520191-10519693)
               

               
               1-493, gnl|Hg17|chr10 (33631326-33630791)
               

               
               1-493, gnl|Mm7|chr8 (126996002-126996452)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               gul (0.177588)
               

               
               che (0.136314)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               che (0.136314)

	1-493, gnl\|bosTau2\|chr13 (10520191-10519693)
	1-493, gnl\|Hg17\|chr10 (33631326-33630791)
	1-493, gnl\|Mm7\|chr8 (126996002-126996452)