Ss1.1-rgul0122_n12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CATCTGTGGCCTGCTTTTCTCTAAGAGTGTGTGCATCTGTGACAGGCCAGAGCATTTCAA ACATAATACGCCTGTCTGCCGAGGTGCAGTTAGATTCCCTGAAACAAAAAGGGGCCGTTA AACGCACACTCTTCCTTGATAACCATCAGTCACATCGCATCTTCCCTCTCGTGGTAAAGG GGCAGAAATCCCTCCAGTGCCAGGATTTTACCGTTTACCTTCGGGACGAAACTGAATTCC GTGATAAATTATCTCCAATCAACATTAGTTTGAATTACAGTTTGGACGAATCCACCTTTA AAGAAGGTCCAGAAGTGAAACCCATATTGAACCACTATAGGGCAAGTGTTGTCACTGAAC AGGCTCACATCTTAGTCGACTGTGGAGAAGATAACATGTGCATTCCTGACTTGAAGCTGT CAGCGAGACCAGATAAGCAGCAAGTCATCATCGGAGATGAAAACCACCTTATGCTCCTCA TCAATGCGAGAAATGAAGGGGAAGGTGCCTACGAAGCTGAGCTCTTCGTGACCATCCCAG AAGAGGCTGATTATGTCGGGATTGAGCGCAGCAACAAGGGAGTGCGACCACTGAGCTGTG AGTACAAGATGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CATCTGTGGCCTGCTTTTCTCTAAGAGTGTGTGCATCTGTGACAGGCCAGAGCATTTCAA ACATAATACGCCTGTCTGCCGAGGTGCAGTTAGATTCCCTGAAACAAAAAGGGGCCGTTA AACGCACACTCTTCCTTGATAACCATCAGTCACATCGCATCTTCCCTCTCGTGGTAAAGG GGCAGAAATCCCTCCAGTGCCAGGATTTTACCGTTTACCTTCGGGACGAAACTGAATTCC GTGATAAATTATCTCCAATCAACATTAGTTTGAATTACAGTTTGGACGAATCCACCTTTA AAGAAGGTCCAGAAGTGAAACCCATATTGAACCACTATAGGGCAAGTGTTGTCACTGAAC AGGCTCACATCTTAGTCGACTGTGGAGAAGATAACATGTGCATTCCTGACTTGAAGCTGT CAGCGAGACCAGATAAGCAGCAAGTCATCATCGGAGATGAAAACCACCTTATGCTCCTCA TCAATGCGAGAAATGAAGGGGAAGGTGCCTACGAAGCTGAGCTCTTCGTGACCATCCCAG AAGAGGCTGATTATGTCGGGATTGAGCGCAGCAACAAGGGAGTGCGACCACTGAGCTGTG AGTACAAGATGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 67-223, gnl|bosTau2|chr13 (17992851-17993007) | |
| 67-223, gnl|canFam2|chr2 (24012481-24012317) | |
| 67-223, gnl|dasNov1|scaffold_17941 (8130-7966) | |
| 67-223, gnl|echTel1|scaffold_312384 (1173-1338) | |
| 67-223, gnl|galGal2|chr2 (19688548-19688383) | |
| 67-223, gnl|hg17|chr10 (15689677-15689842) | |
| 67-223, gnl|Hg17|chr10 (15689839-15689683) | |
| 67-223, gnl|loxAfr1|scaffold_1120 (106492-106657) | |
| 67-223, gnl|mm7|chr2 (12132565-12132730) | |
| 67-223, gnl|Mm7|chr2 (12132727-12132571) | |
| 67-223, gnl|monDom2|scaffold_7 (54221877-54221712) | |
| 67-223, gnl|panTro1|chr8 (16186077-16186242) | |
| 67-223, gnl|rheMac2|chr9 (15904457-15904622) | |
| 67-223, gnl|rn3|chr17 (86547747-86547912) | |
| 67-223, gnl|xenTro1|scaffold_1237 (94710-94875) | |
| 224-363, gnl|bosTau2|chr13 (17995481-17995620) | |
| 224-363, gnl|canFam2|chr2 (24013871-24013709) | |
| 224-363, gnl|danRer3|chr16 (23909161-23909308) | |
| 224-363, gnl|dasNov1|scaffold_17941 (9210-9048) | |
| 224-363, gnl|echTel1|scaffold_319278 (138074-138233) | |
| 224-363, gnl|galGal2|chr2 (19689773-19689611) | |
| 224-363, gnl|hg17|chr10 (15688283-15688445) | |
| 224-363, gnl|Hg17|chr10 (15688428-15688289) | |
| 224-363, gnl|loxAfr1|scaffold_194152 (988-1145) | |
| 224-363, gnl|mm7|chr2 (12130857-12131020) | |
| 224-363, gnl|Mm7|chr2 (12131002-12130863) | |
| 224-363, gnl|monDom2|scaffold_7 (54226492-54226330) | |
| 224-363, gnl|oryCun1|scaffold_204452 (20416-20578) | |
| 224-363, gnl|panTro1|chr8 (16184683-16184845) | |
| 224-363, gnl|rheMac2|chr9 (15903062-15903224) | |
| 224-363, gnl|rn3|chr17 (86546161-86546323) | |
| 224-363, gnl|xenTro1|scaffold_1237 (93172-93331) | |
| 431-585, gnl|bosTau2|chr13 (18000791-18000945) | |
| 431-585, gnl|Hg17|chr10 (15686360-15686206) | |
| 431-585, gnl|Mm7|chr2 (12128778-12128624) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 67-223, gnl|bosTau2|chr13 (17992851-17993007) | |
| 67-223, gnl|canFam2|chr2 (24012481-24012317) | |
| 67-223, gnl|dasNov1|scaffold_17941 (8130-7966) | |
| 67-223, gnl|echTel1|scaffold_312384 (1173-1338) | |
| 67-223, gnl|galGal2|chr2 (19688548-19688383) | |
| 67-223, gnl|hg17|chr10 (15689677-15689842) | |
| 67-223, gnl|Hg17|chr10 (15689839-15689683) | |
| 67-223, gnl|loxAfr1|scaffold_1120 (106492-106657) | |
| 67-223, gnl|mm7|chr2 (12132565-12132730) | |
| 67-223, gnl|Mm7|chr2 (12132727-12132571) | |
| 67-223, gnl|monDom2|scaffold_7 (54221877-54221712) | |
| 67-223, gnl|panTro1|chr8 (16186077-16186242) | |
| 67-223, gnl|rheMac2|chr9 (15904457-15904622) | |
| 67-223, gnl|rn3|chr17 (86547747-86547912) | |
| 67-223, gnl|xenTro1|scaffold_1237 (94710-94875) | |
| 224-363, gnl|bosTau2|chr13 (17995481-17995620) | |
| 224-363, gnl|canFam2|chr2 (24013871-24013709) | |
| 224-363, gnl|danRer3|chr16 (23909161-23909308) | |
| 224-363, gnl|dasNov1|scaffold_17941 (9210-9048) | |
| 224-363, gnl|echTel1|scaffold_319278 (138074-138233) | |
| 224-363, gnl|galGal2|chr2 (19689773-19689611) | |
| 224-363, gnl|hg17|chr10 (15688283-15688445) | |
| 224-363, gnl|Hg17|chr10 (15688428-15688289) | |
| 224-363, gnl|loxAfr1|scaffold_194152 (988-1145) | |
| 224-363, gnl|mm7|chr2 (12130857-12131020) | |
| 224-363, gnl|Mm7|chr2 (12131002-12130863) | |
| 224-363, gnl|monDom2|scaffold_7 (54226492-54226330) | |
| 224-363, gnl|oryCun1|scaffold_204452 (20416-20578) | |
| 224-363, gnl|panTro1|chr8 (16184683-16184845) | |
| 224-363, gnl|rheMac2|chr9 (15903062-15903224) | |
| 224-363, gnl|rn3|chr17 (86546161-86546323) | |
| 224-363, gnl|xenTro1|scaffold_1237 (93172-93331) | |
| 431-585, gnl|bosTau2|chr13 (18000791-18000945) | |
| 431-585, gnl|Hg17|chr10 (15686360-15686206) | |
| 431-585, gnl|Mm7|chr2 (12128778-12128624) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| gul (0.355177) | |
| aor (0.195274) |