Ss1.1-rgul0128_g14.5
|
AGTCTTCAATATTTTATTGAACTTAGTGACATAACCATTCAAATAAAGGAAACTTTCAGC
ATGTCTTTATCAGGCTAGCTGATTTTAAAGTCCCCCTTACCAAACATTAGTGGCTTAATT
TAACAGAAAAATATGAATAAAATCTGTTTTTTTTTTTTTTTCGGATTTGCTTTCTGGATA
TACTCTATTATAGGGCTTCAGTTTGTGGTTCACAAAATGTGTCTCAATAAAAATGAAGCA
AATACAGAGTTTAGACAGATAAAATATTTTTATTTTTAGCCTGACTATTTAAAGAGAAGC
ACTGAGGACCTCAGCTTCTTTATCAGTCCTTTGCCTACTCCTTGGAGCAAGAACCCAAAG
CCCTTTATTATGCATTTTGTTTGTTTATTTATTCATGTATTTGTGTTTTATGCAACTTAA
AAAATGCTAAGGTTTGTTTTATATAAGATAAGGCGGGGGTAGGAATTGGTTGCTTTTTAT
AAAATGGCAAATGTACATGCAGGCAACCTTTTTAAATCAAATTATTATTTATTTAGAAGT
ACGGCTTGTCAACATAATCTGAGTTTCCCAAACAGAAAGGCAAGAGCTTCCCATTTGTAC
TTAGATACTTGTTCAGAACATACATTCAGAATGTGG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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AGTCTTCAATATTTTATTGAACTTAGTGACATAACCATTCAAATAAAGGAAACTTTCAGC
ATGTCTTTATCAGGCTAGCTGATTTTAAAGTCCCCCTTACCAAACATTAGTGGCTTAATT
TAACAGAAAAATATGAATAAAATCTGTTTTTTTTTTTTTTTCGGATTTGCTTTCTGGATA
TACTCTATTATAGGGCTTCAGTTTGTGGTTCACAAAATGTGTCTCAATAAAAATGAAGCA
AATACAGAGTTTAGACAGATAAAATATTTTTATTTTTAGCCTGACTATTTAAAGAGAAGC
ACTGAGGACCTCAGCTTCTTTATCAGTCCTTTGCCTACTCCTTGGAGCAAGAACCCAAAG
CCCTTTATTATGCATTTTGTTTGTTTATTTATTCATGTATTTGTGTTTTATGCAACTTAA
AAAATGCTAAGGTTTGTTTTATATAAGATAAGGCGGGGGTAGGAATTGGTTGCTTTTTAT
AAAATGGCAAATGTACATGCAGGCAACCTTTTTAAATCAAATTATTATTTATTTAGAAGT
ACGGCTTGTCAACATAATCTGAGTTTCCCAAACAGAAAGGCAAGAGCTTCCCATTTGTAC
TTAGATACTTGTTCAGAACATACATTCAGAATGTGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
93-635, gnl|bosTau2|chr21 (18102501-18103027) |
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93-635, gnl|canFam2|chr3 (57764307-57764900) |
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93-635, gnl|dasNov1|scaffold_19558 (53222-52589) |
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93-635, gnl|echTel1|scaffold_232525 (954-449) |
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93-635, gnl|hg17|chr15 (81595306-81595936) |
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93-635, gnl|Hg17|chr15 (81595952-81595418) |
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93-635, gnl|loxAfr1|scaffold_35492 (16522-17138) |
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93-635, gnl|mm7|chr7 (77755619-77756228) |
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93-635, gnl|Mm7|chr7 (77756240-77755742) |
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93-635, gnl|monDom2|scaffold_45 (1969765-1970470) |
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93-635, gnl|oryCun1|scaffold_171775 (63228-62669) |
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93-635, gnl|panTro1|chr16 (82398375-82399008) |
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93-635, gnl|rheMac2|chr15 (13481123-13481758) |
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93-635, gnl|rn3|chr1 (138175539-138176145) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
93-635, gnl|bosTau2|chr21 (18102501-18103027) |
|
93-635, gnl|canFam2|chr3 (57764307-57764900) |
|
93-635, gnl|dasNov1|scaffold_19558 (53222-52589) |
|
93-635, gnl|echTel1|scaffold_232525 (954-449) |
|
93-635, gnl|hg17|chr15 (81595306-81595936) |
|
93-635, gnl|Hg17|chr15 (81595952-81595418) |
|
93-635, gnl|loxAfr1|scaffold_35492 (16522-17138) |
|
93-635, gnl|mm7|chr7 (77755619-77756228) |
|
93-635, gnl|Mm7|chr7 (77756240-77755742) |
|
93-635, gnl|monDom2|scaffold_45 (1969765-1970470) |
|
93-635, gnl|oryCun1|scaffold_171775 (63228-62669) |
|
93-635, gnl|panTro1|chr16 (82398375-82399008) |
|
93-635, gnl|rheMac2|chr15 (13481123-13481758) |
|
93-635, gnl|rn3|chr1 (138175539-138176145) |
|
gul (0.177588) |
|
fhi (0.169578) |
|
kid (0.129735) |
|
tra (0.123092) |
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cty (0.10408) |
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gul (0.177588) |
|
fhi (0.169578) |
|
kid (0.129735) |
|
tra (0.123092) |
|
cty (0.10408) |
