Non-Coding RNA Search

Ss1.1-rgul0129_g10.5

Sequence:


               
               GCCATGGGTAAGGCCAGCTGGTGTAGCCTAACCGGGACCTATCCCAGGGGCGTGGTCATC
CCAGTGGGGAACCCTGGGCCCCTCAGTGTTAAACAGTGCATCTCGGTGGACTTAGCCGAG
TATATAGTAAGATCTTGTAGGGTAAGTTCTGGCACAGTCAAACTGCTCTTTGGAGATGCT
GGAGTTTGTATCTGTAGGATGCATGTGCCCATGTGCTGTGCTGAGTTCTGAAGAACAACT
GATGGCAGTCAGGGACATGGTCAGGGCTTAAGTGGTAGCCAAGCAGGATTTGGGGCTCTC
AGTTTTCCCAAAGGTAGACTGAATGCAGCAGAGGCTTCACATGCTCTGGAGGAGAATGTG
TAAAAAAGAAGCCAGGAAAACAATGCACTTACTGAAGAATCTCTAAATCCACAGCTTATT
CACACCTCAAGGGTTAGGAAGGTTGGATATCTAACAGCTAAGACTGTCCCTGCTGTCCAT
GAAATTTGAGCCAAGGTCACCAAATCCGGACCACAGCAGAATGCCCAGGCCCTGTCCTTG
TGCACTAATGGCCCTTCTTTCTCATCCTGACCAACAGATCATTGCCCCTCCTGAGCGCAA
ATACTCCGTCTGGATTGGTGGCTCCATCCTGGCCTCTCTGTCCACCTTCCAGCAAATGTG
GATCAGCAAACAGGAGTACGACGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCATGGGTAAGGCCAGCTGGTGTAGCCTAACCGGGACCTATCCCAGGGGCGTGGTCATC
CCAGTGGGGAACCCTGGGCCCCTCAGTGTTAAACAGTGCATCTCGGTGGACTTAGCCGAG
TATATAGTAAGATCTTGTAGGGTAAGTTCTGGCACAGTCAAACTGCTCTTTGGAGATGCT
GGAGTTTGTATCTGTAGGATGCATGTGCCCATGTGCTGTGCTGAGTTCTGAAGAACAACT
GATGGCAGTCAGGGACATGGTCAGGGCTTAAGTGGTAGCCAAGCAGGATTTGGGGCTCTC
AGTTTTCCCAAAGGTAGACTGAATGCAGCAGAGGCTTCACATGCTCTGGAGGAGAATGTG
TAAAAAAGAAGCCAGGAAAACAATGCACTTACTGAAGAATCTCTAAATCCACAGCTTATT
CACACCTCAAGGGTTAGGAAGGTTGGATATCTAACAGCTAAGACTGTCCCTGCTGTCCAT
GAAATTTGAGCCAAGGTCACCAAATCCGGACCACAGCAGAATGCCCAGGCCCTGTCCTTG
TGCACTAATGGCCCTTCTTTCTCATCCTGACCAACAGATCATTGCCCCTCCTGAGCGCAA
ATACTCCGTCTGGATTGGTGGCTCCATCCTGGCCTCTCTGTCCACCTTCCAGCAAATGTG
GATCAGCAAACAGGAGTACGACGA

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               7-296, gnl|bosTau2|chr26 (5409063-5408780)
               

               
               7-296, gnl|Hg17|chr10 (90685666-90685375)
               


               
               363-684, gnl|bosTau2|chr26 (5408387-5408067)
               

               
               363-684, gnl|Hg17|chr10 (90685329-90684997)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-296, gnl|bosTau2|chr26 (5409063-5408780)
               

               
               7-296, gnl|Hg17|chr10 (90685666-90685375)
               


               
               363-684, gnl|bosTau2|chr26 (5408387-5408067)
               

               
               363-684, gnl|Hg17|chr10 (90685329-90684997)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               gul (0.355177)
               

               
               aor (0.195274)
               

               
               lyg (0.133103)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.355177)
               

               
               aor (0.195274)
               

               
               lyg (0.133103)

	7-296, gnl\|bosTau2\|chr26 (5409063-5408780)
	7-296, gnl\|Hg17\|chr10 (90685666-90685375)

	363-684, gnl\|bosTau2\|chr26 (5408387-5408067)
	363-684, gnl\|Hg17\|chr10 (90685329-90684997)