Non-Coding RNA Search

Ss1.1-rhea17_p3.5

Sequence:


               
               CCTGGAGGTATGATGGTGCTGGTCTTAATATGAGAGCAAAAAGAGTCTTGGAAGGACATG
AAGCCCCCTAGTGGCGAGGGATGACCGCTCAGCCCACACTGTTGAAAAGATGAAAACTTG
TGGTTGGGTTTTTCTTTTCTAGCCTGGAAAAAAGTTGTTGAAAGAAAGCGGGGTACCCGC
CAGGTACTCTCTGCCTCTCTGCTGTGGGCAGATGATACCCTAGAGGCCCAGCTGTGCTGT
CATGGGGTCCCCCTGGATCTTGCTGGTCCCATCAACTCATGACTGGTTGCTCCTCCTCAA
AATCAGGGTGAAAAAGTTCTGAGGTCGGTGGATGAGAAGAGACGTGATGGCGTGATCTGA
AATAAAACCCCTTTATTTTATGTTTTGGAAAACTTTTCAAAGGTGAAAAGCAAACATATG
GCCAGGCCACTTAAAACCAGTATCTACTTTTTTTTCTCCTGATCAAATTGTAGACCTCAA
AGATCTGATGAAGCTTCTCTGCCGTTGCCACTTTCCCCTTTGATTGTACTGGGAAGCTAA
GTCGTGGCAAATATGTTTCAAATCTGCAAATAAATAGCAGCTGCTCTGAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTGGAGGTATGATGGTGCTGGTCTTAATATGAGAGCAAAAAGAGTCTTGGAAGGACATG
AAGCCCCCTAGTGGCGAGGGATGACCGCTCAGCCCACACTGTTGAAAAGATGAAAACTTG
TGGTTGGGTTTTTCTTTTCTAGCCTGGAAAAAAGTTGTTGAAAGAAAGCGGGGTACCCGC
CAGGTACTCTCTGCCTCTCTGCTGTGGGCAGATGATACCCTAGAGGCCCAGCTGTGCTGT
CATGGGGTCCCCCTGGATCTTGCTGGTCCCATCAACTCATGACTGGTTGCTCCTCCTCAA
AATCAGGGTGAAAAAGTTCTGAGGTCGGTGGATGAGAAGAGACGTGATGGCGTGATCTGA
AATAAAACCCCTTTATTTTATGTTTTGGAAAACTTTTCAAAGGTGAAAAGCAAACATATG
GCCAGGCCACTTAAAACCAGTATCTACTTTTTTTTCTCCTGATCAAATTGTAGACCTCAA
AGATCTGATGAAGCTTCTCTGCCGTTGCCACTTTCCCCTTTGATTGTACTGGGAAGCTAA
GTCGTGGCAAATATGTTTCAAATCTGCAAATAAATAGCAGCTGCTCTGAAAAAAAAAAAA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               40-589, gnl|bosTau2|chr16 (10604152-10603613)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               40-589, gnl|bosTau2|chr16 (10604152-10603613)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               hea (0.408998)
               

               
               eje (0.197668)
               

               
               lnt (0.142308)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.408998)
               

               
               eje (0.197668)
               

               
               lnt (0.142308)