Non-Coding RNA Search

Ss1.1-rhea18_l14.5

Sequence:


               
               GAAAATAACATAGCCCATTGGTAGGTAATCATTCCTTTGCATGTGTGGTTTTTTTGTTGT
TTTTTTTTTTTTTTCATGCACATCTACCTCTTCCAGCTGTTTTGAGTTCTCTTGAGTCTG
TGCCTGTGAAATCTCATCCAACTTTTGATTATTCATGAATTGATGATCCACTGAATGGGT
CACTCAGTCTTTTGCTGACATTTTCATCCTGGTGCACAGTCTCGTCTGCATCCACTGTGT
TCCCCAGCAGTAGCTTTTGAGAATGGGTTCGGTGGGGAGAGGAGACTGAAGTTAGGGTAA
AGTAATTTACTGGCAGTGGGAATCTTTGAGTTTCATTGATTTCCTCTGTTCTTTCTGTTG
CCATAGAGAAGAAAGCCAGCTACTCCTTCAGTGTCCCTTCTGTGAGTATCTCCCTTAGCA
GAAGAAAACAACCCAACCAGCAACACCCCACTCTCATGGTGCATCTGAAATGTGATTCCA
TTGTTCTTATAACTCTTCAGGGAACATATCCACATTAAGTGAGGTGAAATGCATTCAGGA
GGCTCTTTCTTGTATTTAAAAAAATAGCTTTTTTTTTTTTTTTTTTTTGCTTTTTAGAGC
CACACCCATAGAAATGGAAGTCCCCAGGCTAGGGGTTGAATCCAAGCTGCAGCTGCCAGC
CTATGCCACAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAATAACATAGCCCATTGGTAGGTAATCATTCCTTTGCATGTGTGGTTTTTTTGTTGT
TTTTTTTTTTTTTTCATGCACATCTACCTCTTCCAGCTGTTTTGAGTTCTCTTGAGTCTG
TGCCTGTGAAATCTCATCCAACTTTTGATTATTCATGAATTGATGATCCACTGAATGGGT
CACTCAGTCTTTTGCTGACATTTTCATCCTGGTGCACAGTCTCGTCTGCATCCACTGTGT
TCCCCAGCAGTAGCTTTTGAGAATGGGTTCGGTGGGGAGAGGAGACTGAAGTTAGGGTAA
AGTAATTTACTGGCAGTGGGAATCTTTGAGTTTCATTGATTTCCTCTGTTCTTTCTGTTG
CCATAGAGAAGAAAGCCAGCTACTCCTTCAGTGTCCCTTCTGTGAGTATCTCCCTTAGCA
GAAGAAAACAACCCAACCAGCAACACCCCACTCTCATGGTGCATCTGAAATGTGATTCCA
TTGTTCTTATAACTCTTCAGGGAACATATCCACATTAAGTGAGGTGAAATGCATTCAGGA
GGCTCTTTCTTGTATTTAAAAAAATAGCTTTTTTTTTTTTTTTTTTTTGCTTTTTAGAGC
CACACCCATAGAAATGGAAGTCCCCAGGCTAGGGGTTGAATCCAAGCTGCAGCTGCCAGC
CTATGCCACAGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               62-556, gnl|bosTau2|chr3 (20197584-20198055)
               

               
               62-556, gnl|Hg17|chr1 (119875161-119874670)
               

               
               62-556, gnl|Mm7|chr3 (98302483-98303025)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               62-556, gnl|bosTau2|chr3 (20197584-20198055)
               

               
               62-556, gnl|Hg17|chr1 (119875161-119874670)
               

               
               62-556, gnl|Mm7|chr3 (98302483-98303025)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hea (0.204499)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)

	62-556, gnl\|bosTau2\|chr3 (20197584-20198055)
	62-556, gnl\|Hg17\|chr1 (119875161-119874670)
	62-556, gnl\|Mm7\|chr3 (98302483-98303025)