Non-Coding RNA Search

Ss1.1-rhea23_d24.5

Sequence:


               
               CAGGAACCGAGTCACAGAGCTCCCCGTGCCCAAGACGAGCCTCAGCGAGACGGCGGCGGG
CGCGCTGCCCTGGAGCACGTTTTCCGTTTGGACAAGCCTTGCCCAGTTTTCATCGGTGCC
AACATTTCAAAACTTCATCCCGTTTATAAGGTGATTTTTCTGGCTTATTTTATTTCTACT
TTAATCTCTCAGTGCTCATAGATGAAGACGTAAGTCTGAGACCACGAAAGAGATTTTTTT
TTTTAAATACTGTACCATTATTAGCATAGCAGAGACTAAAACATGGTATTATCCAGTGAC
AAAGGAACTGGGGAGCTAATTGTAGGTTAGTGCTGGAGATGGTAAAGCTGCCTTTACTTG
AACAGTCCGAAAGCATTAAAGGTTCATTTCCAAAGGAATGTTTTGTGACGTAGGAAAATT
TTAAAGCAGTTTTTGCTAAAAAGATCATTTTCTAGAGTTTGTATTATACTTATATCAGCA
AACTCGACTGGGAATGTATTTGTGATTTAAGCAGTTAGAGGATAAATATTAGACCACACC
GCTGTTAAACACACACTCATCCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGAACCGAGTCACAGAGCTCCCCGTGCCCAAGACGAGCCTCAGCGAGACGGCGGCGGG
CGCGCTGCCCTGGAGCACGTTTTCCGTTTGGACAAGCCTTGCCCAGTTTTCATCGGTGCC
AACATTTCAAAACTTCATCCCGTTTATAAGGTGATTTTTCTGGCTTATTTTATTTCTACT
TTAATCTCTCAGTGCTCATAGATGAAGACGTAAGTCTGAGACCACGAAAGAGATTTTTTT
TTTTAAATACTGTACCATTATTAGCATAGCAGAGACTAAAACATGGTATTATCCAGTGAC
AAAGGAACTGGGGAGCTAATTGTAGGTTAGTGCTGGAGATGGTAAAGCTGCCTTTACTTG
AACAGTCCGAAAGCATTAAAGGTTCATTTCCAAAGGAATGTTTTGTGACGTAGGAAAATT
TTAAAGCAGTTTTTGCTAAAAAGATCATTTTCTAGAGTTTGTATTATACTTATATCAGCA
AACTCGACTGGGAATGTATTTGTGATTTAAGCAGTTAGAGGATAAATATTAGACCACACC
GCTGTTAAACACACACTCATCCAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               83-560, gnl|bosTau2|chr12 (17985476-17985933)
               

               
               83-560, gnl|Hg17|chr13 (27019729-27019269)
               

               
               83-560, gnl|Mm7|chr5 (145913003-145912496)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               83-560, gnl|bosTau2|chr12 (17985476-17985933)
               

               
               83-560, gnl|Hg17|chr13 (27019729-27019269)
               

               
               83-560, gnl|Mm7|chr5 (145913003-145912496)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               hea (0.204499)
               

               
               csp (0.161186)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)
               

               
               csp (0.161186)

	83-560, gnl\|bosTau2\|chr12 (17985476-17985933)
	83-560, gnl\|Hg17\|chr13 (27019729-27019269)
	83-560, gnl\|Mm7\|chr5 (145913003-145912496)