Ss1.1-rhea27_a5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAAAGAGAAGTAACAGTGAAAGCAAAGAAAGCAGAGAAACAAAATTAGATGGTCCTGGT GAAAATGTCAGTGAGGATGAGGCTCAATCAAGTAATCAACGAAAGAGAGCTAATAAGCAC AAGTGGGTACCACTCCACTTAGATGATATAAGACCAGACAGTCAAGAAAGACCAGGGTCC CGCAATAGCTCAAGATGTCAACCTGAAACAAATAAATCATCGCATAACAGTAGGAGAACT GATACACGAAGTTGGAGGCGTGAAAGAGAAAAAAGAGATGATCAAGATGAAGTTTCCAGT GTGAGAAGTGAGGGTGGTAATATCCGAGGTTCCTTTAGAGGCCGAGGAAGAGGCCGAGGA CGGGGAAGAGGACGAGGCAGAGGAAATCCTCGATTGAACTTTGATTATGCATATGGTTAT CGAGAACATGGTGAAAGGACTGAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAAAGAGAAGTAACAGTGAAAGCAAAGAAAGCAGAGAAACAAAATTAGATGGTCCTGGT GAAAATGTCAGTGAGGATGAGGCTCAATCAAGTAATCAACGAAAGAGAGCTAATAAGCAC AAGTGGGTACCACTCCACTTAGATGATATAAGACCAGACAGTCAAGAAAGACCAGGGTCC CGCAATAGCTCAAGATGTCAACCTGAAACAAATAAATCATCGCATAACAGTAGGAGAACT GATACACGAAGTTGGAGGCGTGAAAGAGAAAAAAGAGATGATCAAGATGAAGTTTCCAGT GTGAGAAGTGAGGGTGGTAATATCCGAGGTTCCTTTAGAGGCCGAGGAAGAGGCCGAGGA CGGGGAAGAGGACGAGGCAGAGGAAATCCTCGATTGAACTTTGATTATGCATATGGTTAT CGAGAACATGGTGAAAGGACTGAT |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 108-276, gnl|bosTau2|chr17 (18716224-18716393) | |
| 108-276, gnl|canFam2|chr19 (15893130-15892985) | |
| 108-276, gnl|canFam2|chr19 (15893130-15892987) | |
| 108-276, gnl|dasNov1|scaffold_33605 (12529-12384) | |
| 108-276, gnl|dasNov1|scaffold_93721 (462-312) | |
| 108-276, gnl|echTel1|scaffold_299539 (3581-3715) | |
| 108-276, gnl|echTel1|scaffold_299539 (3581-3724) | |
| 108-276, gnl|galGal2|chr4 (34885219-34885367) | |
| 108-276, gnl|hg17|chr4 (129360924-129361069) | |
| 108-276, gnl|hg17|chr4 (64044811-64044949) | |
| 108-276, gnl|Hg17|chr4 (129360923-129361093) | |
| 108-276, gnl|loxAfr1|scaffold_35102 (7293-7438) | |
| 108-276, gnl|loxAfr1|scaffold_35102 (7293-7436) | |
| 108-276, gnl|mm7|chr3 (40741755-40741900) | |
| 108-276, gnl|Mm7|chr3 (40741754-40741930) | |
| 108-276, gnl|mm7|chr8 (108351960-108351815) | |
| 108-276, gnl|monDom2|scaffold_137 (1457175-1457320) | |
| 108-276, gnl|monDom2|scaffold_137 (1457176-1457318) | |
| 108-276, gnl|oryCun1|scaffold_194970 (1866-2011) | |
| 108-276, gnl|oryCun1|scaffold_194970 (1866-2009) | |
| 108-276, gnl|panTro1|chr3 (146235808-146235953) | |
| 108-276, gnl|panTro1|chr3 (82636143-82636005) | |
| 108-276, gnl|rheMac2|chr5 (120415355-120415500) | |
| 108-276, gnl|rheMac2|chr5 (66060525-66060402) | |
| 108-276, gnl|rn3|chr2 (127859588-127859733) | |
| 108-276, gnl|rn3|chr2 (127859588-127859731) | |
| 108-276, gnl|xenTro1|scaffold_426 (259288-259145) | |
| 108-276, gnl|xenTro1|scaffold_426 (259288-259152) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 108-276, gnl|bosTau2|chr17 (18716224-18716393) | |
| 108-276, gnl|canFam2|chr19 (15893130-15892985) | |
| 108-276, gnl|canFam2|chr19 (15893130-15892987) | |
| 108-276, gnl|dasNov1|scaffold_33605 (12529-12384) | |
| 108-276, gnl|dasNov1|scaffold_93721 (462-312) | |
| 108-276, gnl|echTel1|scaffold_299539 (3581-3715) | |
| 108-276, gnl|echTel1|scaffold_299539 (3581-3724) | |
| 108-276, gnl|galGal2|chr4 (34885219-34885367) | |
| 108-276, gnl|hg17|chr4 (129360924-129361069) | |
| 108-276, gnl|hg17|chr4 (64044811-64044949) | |
| 108-276, gnl|Hg17|chr4 (129360923-129361093) | |
| 108-276, gnl|loxAfr1|scaffold_35102 (7293-7438) | |
| 108-276, gnl|loxAfr1|scaffold_35102 (7293-7436) | |
| 108-276, gnl|mm7|chr3 (40741755-40741900) | |
| 108-276, gnl|Mm7|chr3 (40741754-40741930) | |
| 108-276, gnl|mm7|chr8 (108351960-108351815) | |
| 108-276, gnl|monDom2|scaffold_137 (1457175-1457320) | |
| 108-276, gnl|monDom2|scaffold_137 (1457176-1457318) | |
| 108-276, gnl|oryCun1|scaffold_194970 (1866-2011) | |
| 108-276, gnl|oryCun1|scaffold_194970 (1866-2009) | |
| 108-276, gnl|panTro1|chr3 (146235808-146235953) | |
| 108-276, gnl|panTro1|chr3 (82636143-82636005) | |
| 108-276, gnl|rheMac2|chr5 (120415355-120415500) | |
| 108-276, gnl|rheMac2|chr5 (66060525-66060402) | |
| 108-276, gnl|rn3|chr2 (127859588-127859733) | |
| 108-276, gnl|rn3|chr2 (127859588-127859731) | |
| 108-276, gnl|xenTro1|scaffold_426 (259288-259145) | |
| 108-276, gnl|xenTro1|scaffold_426 (259288-259152) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hea (0.204499) |