Non-Coding RNA Search

Ss1.1-rhea39_e15.5

Sequence:


               
               GAGACCTTGTTTAAAGAAGAGAAAGAAGGCCAGCGTCACTCAGCGATGGTTAAAGAGGAT
GTGGGTTCAGGGATGCAGACGGGGACGAGGCCACGTGAGGATTTTTAAACCACGCAGTTC
TTCTGGAATCAAACTATTTTCACCTAAGGAAAATGCATAAAAGCATTTTAGAAGTCAAGT
TCTTAGAACATAGATGGATTTTTCACTGTGTATTCAAGATTCATTCAAGCATTTACCACC
TGTTAGAACTGGCTCTGGACCAGACCAGACACTGACAAAGGTAAAGCGTGTGGACTTTCT
GGCCAGCAAGAAGAGAACGTTCCATGGTGGGATCTGCTCTGAAGTCTCCGGTGTGTAATA
TGACGTGATCATTAGGAAGGTGAAAGAGGACCATGACAGCACCTGGACAGCTGAACATAA
ACATTTCAAAGGAATATTCTTAACACAGGCAAAGCATCTAAAGGAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGACCTTGTTTAAAGAAGAGAAAGAAGGCCAGCGTCACTCAGCGATGGTTAAAGAGGAT
GTGGGTTCAGGGATGCAGACGGGGACGAGGCCACGTGAGGATTTTTAAACCACGCAGTTC
TTCTGGAATCAAACTATTTTCACCTAAGGAAAATGCATAAAAGCATTTTAGAAGTCAAGT
TCTTAGAACATAGATGGATTTTTCACTGTGTATTCAAGATTCATTCAAGCATTTACCACC
TGTTAGAACTGGCTCTGGACCAGACCAGACACTGACAAAGGTAAAGCGTGTGGACTTTCT
GGCCAGCAAGAAGAGAACGTTCCATGGTGGGATCTGCTCTGAAGTCTCCGGTGTGTAATA
TGACGTGATCATTAGGAAGGTGAAAGAGGACCATGACAGCACCTGGACAGCTGAACATAA
ACATTTCAAAGGAATATTCTTAACACAGGCAAAGCATCTAAAGGAAGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               117-283, gnl|bosTau2|chr26 (22752379-22752213)
               

               
               117-283, gnl|Hg17|chr10 (115577420-115577581)
               

               
               117-283, gnl|Mm7|chr19 (56436576-56436758)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               117-283, gnl|bosTau2|chr26 (22752379-22752213)
               

               
               117-283, gnl|Hg17|chr10 (115577420-115577581)
               

               
               117-283, gnl|Mm7|chr19 (56436576-56436758)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               hea (0.204499)
               

               
               ssp (0.13552)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)
               

               
               ssp (0.13552)

	117-283, gnl\|bosTau2\|chr26 (22752379-22752213)
	117-283, gnl\|Hg17\|chr10 (115577420-115577581)
	117-283, gnl\|Mm7\|chr19 (56436576-56436758)