Ss1.1-rhea39_g15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTGAATCCTACTTTGGTAAACTCTATGTAATTTTAACAAGTTTTATACTCTCTGGGTA GATACTATTACTCATTTATAATGTTCATAATACATTGTACATTATAACATTTCTTAATGT TCATAACACACTATTTTTTTGTCTTTTTTTTTTTTTTAGGGCCACACC------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------TCCTCATGGATACTAACCACAATG GGAACCCCGTAATACACTAGTATTTCTATTTCCTCACCACTATCTCATTCTTATTCCTGT TTGCACTGAATGAACAGAGGTAAAAGATGAGAGAGATTTAGACAACAAAACAGTATCTCC TAAGGCCTAGGCTTATTCCATTACCTAGTCTCCTAGGAAAGCTCTTCTAAAAATATTAAC CAAAAGCCCATTAAGGAGCATGAGTATGTTTGAGTTTAATAAAACATTTGCGTAGTTAAA ACCTGGTAATAAGACAATGTGTAAATCTATAAAATTTTGTTAGAGCTGCTTAATACTTGC CTAAAGTACAAAAAAATTCATTGGTTAAGACAATATTTTCCATTACTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTGAATCCTACTTTGGTAAACTCTATGTAATTTTAACAAGTTTTATACTCTCTGGGTA GATACTATTACTCATTTATAATGTTCATAATACATTGTACATTATAACATTTCTTAATGT TCATAACACACTATTTTTTTGTCTTTTTTTTTTTTTTAGGGCCACACC------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------TCCTCATGGATACTAACCACAATG GGAACCCCGTAATACACTAGTATTTCTATTTCCTCACCACTATCTCATTCTTATTCCTGT TTGCACTGAATGAACAGAGGTAAAAGATGAGAGAGATTTAGACAACAAAACAGTATCTCC TAAGGCCTAGGCTTATTCCATTACCTAGTCTCCTAGGAAAGCTCTTCTAAAAATATTAAC CAAAAGCCCATTAAGGAGCATGAGTATGTTTGAGTTTAATAAAACATTTGCGTAGTTAAA ACCTGGTAATAAGACAATGTGTAAATCTATAAAATTTTGTTAGAGCTGCTTAATACTTGC CTAAAGTACAAAAAAATTCATTGGTTAAGACAATATTTTCCATTACTA |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 23-139, gnl|bosTau2|chr2 (14459025-14458910) | |
| 23-139, gnl|canFam2|chr36 (21500500-21500597) | |
| 23-139, gnl|echTel1|scaffold_312027 (77552-77627) | |
| 23-139, gnl|hg17|chr2 (175118918-175119034) | |
| 23-139, gnl|Hg17|chr2 (175119065-175118934) | |
| 23-139, gnl|loxAfr1|scaffold_3037 (4904-4972) | |
| 23-139, gnl|monDom2|scaffold_2 (73996561-73996683) | |
| 23-139, gnl|oryCun1|scaffold_177151 (49515-49617) | |
| 23-139, gnl|panTro1|chr13 (64756725-64756841) | |
| 23-139, gnl|rheMac2|chr12 (38044885-38044991) | |
| 234-357, gnl|bosTau2|chr2 (14458351-14458229) | |
| 234-357, gnl|canFam2|chr36 (21500356-21500499) | |
| 234-357, gnl|echTel1|scaffold_312027 (77416-77551) | |
| 234-357, gnl|hg17|chr2 (175118756-175118917) | |
| 234-357, gnl|Hg17|chr2 (175118916-175118789) | |
| 234-357, gnl|loxAfr1|scaffold_3037 (4793-4903) | |
| 234-357, gnl|monDom2|scaffold_2 (73996368-73996560) | |
| 234-357, gnl|oryCun1|scaffold_177151 (49353-49514) | |
| 234-357, gnl|panTro1|chr13 (64756563-64756724) | |
| 234-357, gnl|rheMac2|chr12 (38044723-38044884) | |
| 394-537, gnl|bosTau2|chr2 (14458153-14458013) | |
| 394-537, gnl|Hg17|chr2 (175118683-175118540) | |
| 394-537, gnl|Mm7|chr2 (73179957-73179819) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 23-139, gnl|bosTau2|chr2 (14459025-14458910) | |
| 23-139, gnl|canFam2|chr36 (21500500-21500597) | |
| 23-139, gnl|echTel1|scaffold_312027 (77552-77627) | |
| 23-139, gnl|hg17|chr2 (175118918-175119034) | |
| 23-139, gnl|Hg17|chr2 (175119065-175118934) | |
| 23-139, gnl|loxAfr1|scaffold_3037 (4904-4972) | |
| 23-139, gnl|monDom2|scaffold_2 (73996561-73996683) | |
| 23-139, gnl|oryCun1|scaffold_177151 (49515-49617) | |
| 23-139, gnl|panTro1|chr13 (64756725-64756841) | |
| 23-139, gnl|rheMac2|chr12 (38044885-38044991) | |
| 234-357, gnl|bosTau2|chr2 (14458351-14458229) | |
| 234-357, gnl|canFam2|chr36 (21500356-21500499) | |
| 234-357, gnl|echTel1|scaffold_312027 (77416-77551) | |
| 234-357, gnl|hg17|chr2 (175118756-175118917) | |
| 234-357, gnl|Hg17|chr2 (175118916-175118789) | |
| 234-357, gnl|loxAfr1|scaffold_3037 (4793-4903) | |
| 234-357, gnl|monDom2|scaffold_2 (73996368-73996560) | |
| 234-357, gnl|oryCun1|scaffold_177151 (49353-49514) | |
| 234-357, gnl|panTro1|chr13 (64756563-64756724) | |
| 234-357, gnl|rheMac2|chr12 (38044723-38044884) | |
| 394-537, gnl|bosTau2|chr2 (14458153-14458013) | |
| 394-537, gnl|Hg17|chr2 (175118683-175118540) | |
| 394-537, gnl|Mm7|chr2 (73179957-73179819) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hea (0.204499) | |
| cty (0.10408) |