Ss1.1-rhlv02b_l23.5
|
ACCCAGTACGCCCGCACTTGCTCTGTTTCTCTTCTGCAGACTGTGCCATGGGGCTCAGCG
ACGGGGAATGGCAGCTGGTGCTGAACGTCTGGGGGAAGGTGGAGGCTGATGTCGCAGGCC
ATGGGCAGGAGGTCCTCATCAGGCTCTTTAAGGGTCACCCCGAGACCCTGGAGAAATTTG
ATAAGTTTAAGCACCTGAAGTCAGAGGATGAGATGAAGGCCTCTGAGGACCTGAAGAAGC
ACGGCAACACGGTGCTGACTGCCCTGGGGGGCATCCTTAAGAAGAAGGGGCATCATGAGG
CAGAGCTGACGCCCCTGGCCCAATCGCATGCCACCAAGCACAAGATCCCTGTCAAGTACC
TGGAGTTCATCTCAGAAGCCATCATCCAGGTTCTGCAGAGCAAGCATCCTGGGGACTTTG
GTGCTGACGCCCAGGGAGCCATGAGCAAGGCCCTGGAACTCTTCCGGAACGACATGGCGG
CCAAGTACAAGGAGCTGGGCTTCCAGGGCTAAGCCCCCCAGACGCCCCTCACCCACCCAT
CCACTTGGGCCAGGGCCCCCCGCGGAGGGTGGGCGCTGAAGCTCCTGTAGCTGTAGGGTT
TGCTTCTGAGTGTTGCTTTGTTCATGAGAGGTGGGTGGGAGAGGTGGAGGGGCTGGTGGT
GGTGGTGGGGGGGTGTTCAGGTGGTTTCACGTGCGGGGGGGGGGCAGGAGGTTGAGGGGT
GGGGGGGACCAGGTTTTCTGCGGAGGGTCATCACCCTGGGAACCGGGAGAAGCATGGCTT
GGCTCACTGTGGCCCCCAGAGTTTAGGTCCAACTTAACCCACCTCTCCCCGAAATGCCAG
CACAGTCCCTGCCAGCCTCCAAACCGACCCGCGCCTTCCTCCCCGCCTTGAATCACCAAT
CCAAGCTGTAACCCTAAACTCCAGCCATAACTCTCTGATCCATCACTTTGAAGACAGCAG
AACGTCCCTTAGCCCCGGGAAGGAGGCGTGGGCAGGGTGGGACAGTCACACCCAGCTCCT
GGGAGGCGTGGTGTCTGGAACCTAAGTACCTTGCAGGTGACGGATGACGCACCCGGTTTT
AATAAAAGACTCCGCACTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACCCAGTACGCCCGCACTTGCTCTGTTTCTCTTCTGCAGACTGTGCCATGGGGCTCAGCG
ACGGGGAATGGCAGCTGGTGCTGAACGTCTGGGGGAAGGTGGAGGCTGATGTCGCAGGCC
ATGGGCAGGAGGTCCTCATCAGGCTCTTTAAGGGTCACCCCGAGACCCTGGAGAAATTTG
ATAAGTTTAAGCACCTGAAGTCAGAGGATGAGATGAAGGCCTCTGAGGACCTGAAGAAGC
ACGGCAACACGGTGCTGACTGCCCTGGGGGGCATCCTTAAGAAGAAGGGGCATCATGAGG
CAGAGCTGACGCCCCTGGCCCAATCGCATGCCACCAAGCACAAGATCCCTGTCAAGTACC
TGGAGTTCATCTCAGAAGCCATCATCCAGGTTCTGCAGAGCAAGCATCCTGGGGACTTTG
GTGCTGACGCCCAGGGAGCCATGAGCAAGGCCCTGGAACTCTTCCGGAACGACATGGCGG
CCAAGTACAAGGAGCTGGGCTTCCAGGGCTAAGCCCCCCAGACGCCCCTCACCCACCCAT
CCACTTGGGCCAGGGCCCCCCGCGGAGGGTGGGCGCTGAAGCTCCTGTAGCTGTAGGGTT
TGCTTCTGAGTGTTGCTTTGTTCATGAGAGGTGGGTGGGAGAGGTGGAGGGGCTGGTGGT
GGTGGTGGGGGGGTGTTCAGGTGGTTTCACGTGCGGGGGGGGGGCAGGAGGTTGAGGGGT
GGGGGGGACCAGGTTTTCTGCGGAGGGTCATCACCCTGGGAACCGGGAGAAGCATGGCTT
GGCTCACTGTGGCCCCCAGAGTTTAGGTCCAACTTAACCCACCTCTCCCCGAAATGCCAG
CACAGTCCCTGCCAGCCTCCAAACCGACCCGCGCCTTCCTCCCCGCCTTGAATCACCAAT
CCAAGCTGTAACCCTAAACTCCAGCCATAACTCTCTGATCCATCACTTTGAAGACAGCAG
AACGTCCCTTAGCCCCGGGAAGGAGGCGTGGGCAGGGTGGGACAGTCACACCCAGCTCCT
GGGAGGCGTGGTGTCTGGAACCTAAGTACCTTGCAGGTGACGGATGACGCACCCGGTTTT
AATAAAAGACTCCGCACTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
|
gi|47523546|ref|NP_999401.1| |
Protein identifier
|
gi|47523546|ref|NP_999401.1| |
|
132-365, gnl|bosTau2|chr5 (44079108-44078875) |
|
132-365, gnl|canFam2|chr10 (31650822-31650573) |
|
132-365, gnl|dasNov1|scaffold_10826 (36687-36936) |
|
132-365, gnl|echTel1|scaffold_306351 (3410-3164) |
|
132-365, gnl|galGal2|chr1 (48720413-48720162) |
|
132-365, gnl|hg17|chr22 (34331430-34331679) |
|
132-365, gnl|Hg17|chr22 (34331663-34331431) |
|
132-365, gnl|mm7|chr15 (77100527-77100775) |
|
132-365, gnl|Mm7|chr15 (77100759-77100528) |
|
132-365, gnl|panTro1|chr23 (34457963-34458212) |
|
132-365, gnl|rheMac2|chr10 (79524941-79525190) |
|
132-365, gnl|rn3|chr7 (115123842-115124077) |
| |
|
698-1097, gnl|bosTau2|chr5 (44074231-44073822) |
|
698-1097, gnl|Hg17|chr22 (34327704-34327317) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
132-365, gnl|bosTau2|chr5 (44079108-44078875) |
|
132-365, gnl|canFam2|chr10 (31650822-31650573) |
|
132-365, gnl|dasNov1|scaffold_10826 (36687-36936) |
|
132-365, gnl|echTel1|scaffold_306351 (3410-3164) |
|
132-365, gnl|galGal2|chr1 (48720413-48720162) |
|
132-365, gnl|hg17|chr22 (34331430-34331679) |
|
132-365, gnl|Hg17|chr22 (34331663-34331431) |
|
132-365, gnl|mm7|chr15 (77100527-77100775) |
|
132-365, gnl|Mm7|chr15 (77100759-77100528) |
|
132-365, gnl|panTro1|chr23 (34457963-34458212) |
|
132-365, gnl|rheMac2|chr10 (79524941-79525190) |
|
132-365, gnl|rn3|chr7 (115123842-115124077) |
| |
|
698-1097, gnl|bosTau2|chr5 (44074231-44073822) |
|
698-1097, gnl|Hg17|chr22 (34327704-34327317) |
|
hlv (8.77315) |
|
mas (6.72976) |
|
ton (1.9305) |
|
nms (0.427716) |
|
che (0.408942) |
|
tbr (0.308356) |
|
jca (0.22792) |
|
nep (0.183925) |
|
bfe (0.149858) |
|
pty (0.142714) |
|
nca (0.136874) |
|
ssp (0.13552) |
|
hlv (8.77315) |
|
mas (6.72976) |
|
ton (1.9305) |
|
nms (0.427716) |
|
che (0.408942) |
|
tbr (0.308356) |
|
jca (0.22792) |
|
nep (0.183925) |
|
bfe (0.149858) |
|
pty (0.142714) |
|
nca (0.136874) |
|
ssp (0.13552) |
