Non-Coding RNA Search

Ss1.1-rhlv04b_l1.5

Sequence:


               
               GTTCAGCTATTTATTTAGTTCATTAGAAGGAGGAATTTAAATGTCAAGTTTTCTTCCTCA
TCCTTATGAGTTAACACTTCCTTGGGTTGTTGGAGGGTAAAAGTAGATACAAATGACACT
GAGTGTATGGTACAGTGATATTCTCCCATACTTCTTAATGCATGAAGAGAACAAGAGTCA
CACAAGTTTATCACCTTGCACTTCATAGAGAAGGTATATAGAAGTATGGCAAAACCTATC
TCCATTTTCTGTCCCAGTAATTAAGGTTTTCATGATATGTAGGCCTGTCTTTAATCTGGG
TAATTTCATTTTTGCAAATGTAGACACTGGCATTCAAAGGAATGATCCATCTAAATTTTT
TTCAACTGGATTTTGGGAGAAGATACGATCTTGTAGTAATACAGGTTTATTGTTGTTATC
ACCTTATGTCCTCAATTTGCATGTGATCAAATGACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTCAGCTATTTATTTAGTTCATTAGAAGGAGGAATTTAAATGTCAAGTTTTCTTCCTCA
TCCTTATGAGTTAACACTTCCTTGGGTTGTTGGAGGGTAAAAGTAGATACAAATGACACT
GAGTGTATGGTACAGTGATATTCTCCCATACTTCTTAATGCATGAAGAGAACAAGAGTCA
CACAAGTTTATCACCTTGCACTTCATAGAGAAGGTATATAGAAGTATGGCAAAACCTATC
TCCATTTTCTGTCCCAGTAATTAAGGTTTTCATGATATGTAGGCCTGTCTTTAATCTGGG
TAATTTCATTTTTGCAAATGTAGACACTGGCATTCAAAGGAATGATCCATCTAAATTTTT
TTCAACTGGATTTTGGGAGAAGATACGATCTTGTAGTAATACAGGTTTATTGTTGTTATC
ACCTTATGTCCTCAATTTGCATGTGATCAAATGACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-456, gnl|bosTau2|chr5 (22751924-22751480)
               

               
               2-456, gnl|Hg17|chr12 (49158548-49158987)
               

               
               2-456, gnl|Mm7|chr15 (100000138-100000553)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-456, gnl|bosTau2|chr5 (22751924-22751480)
               

               
               2-456, gnl|Hg17|chr12 (49158548-49158987)
               

               
               2-456, gnl|Mm7|chr15 (100000138-100000553)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               hlv (0.139256)
               

               
               cbl (0.114797)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hlv (0.139256)
               

               
               cbl (0.114797)

	2-456, gnl\|bosTau2\|chr5 (22751924-22751480)
	2-456, gnl\|Hg17\|chr12 (49158548-49158987)
	2-456, gnl\|Mm7\|chr15 (100000138-100000553)