Ss1.1-rhlv06b_j17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTACGTGATTGAATTTGCTAGTACAAAACCTGCCTCAGAAAGCACTTTGTCTCAAAGTGA CGCATGCATGACATCACCAGTGTCTTCAGTGCACTGCGCAGCTTCTGACCTGACATCCGA GGAAAGTACAAGTAAAGAGGGCACGTCTCAGGATGCTGAGAGTACCTTTTCTTCTTCTGA AGATTCTGCACACAAGTCTAAGCCAGTGAATCAGCCCCTTCCACCTTCCCGGTCTTCCAT GGAAATGCCTGCACATCCAGCTCCTCGAACGGTCACAGATGAGGAGATAAACTTTGTTAA GACCTGCCTTCAGAGGTGGAGGAGTGAAATTGAACAAGATATACAAGATCTAAAGAATTG TATTGCAAGCACTACGCAGACTATTGAGCAGATGTACTGTGATCCTCTCCTCCGCCAGGT GCCTTACCGCTTGCATGCGGTTCTTGTTCATGAGGGACAAGCAAACGCAGGACACTACTG GGCGTACATCTATAATCAGCCCCGGCAGGTCTGGCTCAAGTACAACGACATCTCCGTTAC TGAGTCTTCCTGGGAAGAACTCGAAAGAGACTCCTATGGGGGCCTGAGAAACGTCAGTGC TTACTGTCTGATGTACATTAATGACAAGCTGCCGCACTGCCATGCAGAATCAGCCCCAAA TGAATTGGATCAGATGTCAGGAGAGGTGGAAGCCCTCTCTGTTGAACTTAAGCATTACAT TCAGGAAGATAACTGGAGGTTTGAGCAAGAAATCGAGGAGTGGGAAGAAGAGCAGTCTTG CAAAATCCCTCAAATGGACTCTTCCACCAGCTCAGCATCACAGGAGTTCTCTCCATCGCA AGAGTCTTCAGTAGCCTCTTCCCATGGGGTTCGCTGCCTGTCCTCGGAGCACGCCGTGAT CGTGAAGGAACAGACTGCCCAGGCTATAGCAAACACGGCCCGCGCCTACGAGAAGAGTGG GGTAGAAGCAGCATTGAGTGAGGCATTCCATGAAGAGTACTCCAGGCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTACGTGATTGAATTTGCTAGTACAAAACCTGCCTCAGAAAGCACTTTGTCTCAAAGTGA CGCATGCATGACATCACCAGTGTCTTCAGTGCACTGCGCAGCTTCTGACCTGACATCCGA GGAAAGTACAAGTAAAGAGGGCACGTCTCAGGATGCTGAGAGTACCTTTTCTTCTTCTGA AGATTCTGCACACAAGTCTAAGCCAGTGAATCAGCCCCTTCCACCTTCCCGGTCTTCCAT GGAAATGCCTGCACATCCAGCTCCTCGAACGGTCACAGATGAGGAGATAAACTTTGTTAA GACCTGCCTTCAGAGGTGGAGGAGTGAAATTGAACAAGATATACAAGATCTAAAGAATTG TATTGCAAGCACTACGCAGACTATTGAGCAGATGTACTGTGATCCTCTCCTCCGCCAGGT GCCTTACCGCTTGCATGCGGTTCTTGTTCATGAGGGACAAGCAAACGCAGGACACTACTG GGCGTACATCTATAATCAGCCCCGGCAGGTCTGGCTCAAGTACAACGACATCTCCGTTAC TGAGTCTTCCTGGGAAGAACTCGAAAGAGACTCCTATGGGGGCCTGAGAAACGTCAGTGC TTACTGTCTGATGTACATTAATGACAAGCTGCCGCACTGCCATGCAGAATCAGCCCCAAA TGAATTGGATCAGATGTCAGGAGAGGTGGAAGCCCTCTCTGTTGAACTTAAGCATTACAT TCAGGAAGATAACTGGAGGTTTGAGCAAGAAATCGAGGAGTGGGAAGAAGAGCAGTCTTG CAAAATCCCTCAAATGGACTCTTCCACCAGCTCAGCATCACAGGAGTTCTCTCCATCGCA AGAGTCTTCAGTAGCCTCTTCCCATGGGGTTCGCTGCCTGTCCTCGGAGCACGCCGTGAT CGTGAAGGAACAGACTGCCCAGGCTATAGCAAACACGGCCCGCGCCTACGAGAAGAGTGG GGTAGAAGCAGCATTGAGTGAGGCATTCCATGAAGAGTACTCCAGGCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 125-347, gnl|bosTau2|chr15 (10761797-10761575) | |
| 125-347, gnl|Hg17|chr11 (113191316-113191106) | |
| 125-347, gnl|Mm7|chr9 (48997887-48998109) | |
| 416-647, gnl|bosTau2|chr15 (10759863-10759632) | |
| 416-647, gnl|canFam2|chr5 (22478024-22477824) | |
| 416-647, gnl|danRer3|chr21 (16089163-16089363) | |
| 416-647, gnl|dasNov1|scaffold_2928 (46047-45847) | |
| 416-647, gnl|echTel1|scaffold_299761 (37408-37209) | |
| 416-647, gnl|fr1|chrUn (7768806-7768611) | |
| 416-647, gnl|galGal2|chr24 (4306423-4306623) | |
| 416-647, gnl|hg17|chr11 (113188202-113188402) | |
| 416-647, gnl|Hg17|chr11 (113188439-113188208) | |
| 416-647, gnl|loxAfr1|scaffold_170238 (208-4) | |
| 416-647, gnl|mm7|chr9 (49000430-49000230) | |
| 416-647, gnl|Mm7|chr9 (49000191-49000422) | |
| 416-647, gnl|monDom2|scaffold_2 (127083036-127082836) | |
| 416-647, gnl|oryCun1|scaffold_202199 (51742-51542) | |
| 416-647, gnl|panTro1|chr9 (115191010-115191210) | |
| 416-647, gnl|rheMac2|chr14 (112287686-112287886) | |
| 416-647, gnl|rn3|chr8 (52311427-52311227) | |
| 416-647, gnl|tetNig1|chrUn_random (29400140-29400335) | |
| 416-647, gnl|xenTro1|scaffold_300 (469570-469371) | |
| 841-983, gnl|bosTau2|chr15 (10756864-10756722) | |
| 841-983, gnl|Hg17|chr11 (113184371-113184229) | |
| 841-983, gnl|Mm7|chr9 (49004333-49004475) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 125-347, gnl|bosTau2|chr15 (10761797-10761575) | |
| 125-347, gnl|Hg17|chr11 (113191316-113191106) | |
| 125-347, gnl|Mm7|chr9 (48997887-48998109) | |
| 416-647, gnl|bosTau2|chr15 (10759863-10759632) | |
| 416-647, gnl|canFam2|chr5 (22478024-22477824) | |
| 416-647, gnl|danRer3|chr21 (16089163-16089363) | |
| 416-647, gnl|dasNov1|scaffold_2928 (46047-45847) | |
| 416-647, gnl|echTel1|scaffold_299761 (37408-37209) | |
| 416-647, gnl|fr1|chrUn (7768806-7768611) | |
| 416-647, gnl|galGal2|chr24 (4306423-4306623) | |
| 416-647, gnl|hg17|chr11 (113188202-113188402) | |
| 416-647, gnl|Hg17|chr11 (113188439-113188208) | |
| 416-647, gnl|loxAfr1|scaffold_170238 (208-4) | |
| 416-647, gnl|mm7|chr9 (49000430-49000230) | |
| 416-647, gnl|Mm7|chr9 (49000191-49000422) | |
| 416-647, gnl|monDom2|scaffold_2 (127083036-127082836) | |
| 416-647, gnl|oryCun1|scaffold_202199 (51742-51542) | |
| 416-647, gnl|panTro1|chr9 (115191010-115191210) | |
| 416-647, gnl|rheMac2|chr14 (112287686-112287886) | |
| 416-647, gnl|rn3|chr8 (52311427-52311227) | |
| 416-647, gnl|tetNig1|chrUn_random (29400140-29400335) | |
| 416-647, gnl|xenTro1|scaffold_300 (469570-469371) | |
| 841-983, gnl|bosTau2|chr15 (10756864-10756722) | |
| 841-983, gnl|Hg17|chr11 (113184371-113184229) | |
| 841-983, gnl|Mm7|chr9 (49004333-49004475) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| elu (0.385356) | |
| hlv (0.278513) | |
| ese (0.126502) |