Ss1.1-rhlv08b_p20.5
               |  | CACAAACTGAAAGAGAAAGCGAAGAAACGAAAGGGCCGTGGCTTTGGCTCCGAAGAGGGG
TCTCGAGCGCGGATGCGTGAAGATTATGACAGCGTGGAGCAGGATGGCGATGAACCCGGA
CCACAACGCTCTGTTGAAGGTTGGATTCTCTTTGTCACTGGAGTCCATTTGCAGCGCCTG
GTGGCGGCCGAACAGCAGAAGGCGGCGGAAGATGGCGGAGCTGGGTGAGGCGGACGAGGC
CGAGTTGCAGCGCCTGGTGGCGGCCGAACAGCAGAAGGCGCAGTTCACTGCACAGGTGCA
TCACTTCATGGAGCTATGTTGGGATAAATGTGTGGAGAAGCCGGGGAATCGCCTAGACTC
TCGCACTGAAAATTGTCTCTCTAGCTGCGTGGACCGCTTCATTGACACCACTCTTGCTAT
CACCAGTCGGTTTGCCCAGATTGTACAGAAAGGAGGGCAGTAGGCCATCCCCTGAGAGAA
TGACAGAAGCAGCAAAGGACTTATTTTTAAGCAGATTGAAGAACCAGTGGGGAAAGACTG
TCAACCTTTTGTCAACTTCAGGCTATTACCAAGCCTGTTGGTGCTAAAAAGTAACAGATC
GAATGTTCAAAAAGTGAGATTTATTTATTTGGAATTCAGAAATTCCACCTTGTATCACAA
CAAGTTATTCAATAAATGTGAGTTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | CACAAACTGAAAGAGAAAGCGAAGAAACGAAAGGGCCGTGGCTTTGGCTCCGAAGAGGGG
TCTCGAGCGCGGATGCGTGAAGATTATGACAGCGTGGAGCAGGATGGCGATGAACCCGGA
CCACAACGCTCTGTTGAAGGTTGGATTCTCTTTGTCACTGGAGTCCATTTGCAGCGCCTG
GTGGCGGCCGAACAGCAGAAGGCGGCGGAAGATGGCGGAGCTGGGTGAGGCGGACGAGGC
CGAGTTGCAGCGCCTGGTGGCGGCCGAACAGCAGAAGGCGCAGTTCACTGCACAGGTGCA
TCACTTCATGGAGCTATGTTGGGATAAATGTGTGGAGAAGCCGGGGAATCGCCTAGACTC
TCGCACTGAAAATTGTCTCTCTAGCTGCGTGGACCGCTTCATTGACACCACTCTTGCTAT
CACCAGTCGGTTTGCCCAGATTGTACAGAAAGGAGGGCAGTAGGCCATCCCCTGAGAGAA
TGACAGAAGCAGCAAAGGACTTATTTTTAAGCAGATTGAAGAACCAGTGGGGAAAGACTG
TCAACCTTTTGTCAACTTCAGGCTATTACCAAGCCTGTTGGTGCTAAAAAGTAACAGATC
GAATGTTCAAAAAGTGAGATTTATTTATTTGGAATTCAGAAATTCCACCTTGTATCACAA
CAAGTTATTCAATAAATGTGAGTTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 
               |  | gi|6912712|ref|NP_036591.1| | 
Protein identifier
               |  | gi|6912712|ref|NP_036591.1| | 
               |  | che (2.58997) | 
               |  | ssp (1.21968) | 
               |  | cje (1.15664) | 
               |  | cki (0.991408) | 
               |  | cst (0.840218) | 
               |  | csk (0.562984) | 
               |  | sto (0.539471) | 
               |  | hlv (0.417769) | 
               |  | ste (0.405625) | 
               |  | fcc (0.39557) | 
               |  | ova (0.387397) | 
               |  | fbs (0.350693) | 
               |  | spc (0.340097) | 
               |  | nje (0.33184) | 
               |  | mga (0.32041) | 
               |  | sme (0.305437) | 
               |  | cag (0.302389) | 
               |  | cte (0.29274) | 
               |  | kid (0.259471) | 
               |  | thg (0.253582) | 
               |  | ece (0.229305) | 
               |  | mas (0.210305) | 
               |  | tes (0.207814) | 
               |  | hea (0.204499) | 
               |  | fli (0.202881) | 
               |  | nbm (0.198649) | 
               |  | jej (0.197844) | 
               |  | eje (0.197668) | 
               |  | fty (0.17584) | 
               |  | ill (0.175593) | 
               |  | rec (0.17307) | 
               |  | cut (0.169924) | 
               |  | nco (0.161734) | 
               |  | bfe (0.149858) | 
               |  | fat (0.147427) | 
               |  | hyp (0.142837) | 
               |  | pty (0.142714) | 
               |  | lnt (0.142308) | 
               |  | nca (0.136874) | 
               |  | pla (0.133672) | 
               |  | lyg (0.133103) | 
               |  | nmm (0.132802) | 
               |  | cov (0.132153) | 
               |  | cly (0.120642) | 
               |  | pgl (0.118483) | 
               |  | ebs (0.118301) | 
               |  | ldo (0.0970026) | 
               |  | che (2.58997) | 
               |  | ssp (1.21968) | 
               |  | cje (1.15664) | 
               |  | cki (0.991408) | 
               |  | cst (0.840218) | 
               |  | csk (0.562984) | 
               |  | sto (0.539471) | 
               |  | hlv (0.417769) | 
               |  | ste (0.405625) | 
               |  | fcc (0.39557) | 
               |  | ova (0.387397) | 
               |  | fbs (0.350693) | 
               |  | spc (0.340097) | 
               |  | nje (0.33184) | 
               |  | mga (0.32041) | 
               |  | sme (0.305437) | 
               |  | cag (0.302389) | 
               |  | cte (0.29274) | 
               |  | kid (0.259471) | 
               |  | thg (0.253582) | 
               |  | ece (0.229305) | 
               |  | mas (0.210305) | 
               |  | tes (0.207814) | 
               |  | hea (0.204499) | 
               |  | fli (0.202881) | 
               |  | nbm (0.198649) | 
               |  | jej (0.197844) | 
               |  | eje (0.197668) | 
               |  | fty (0.17584) | 
               |  | ill (0.175593) | 
               |  | rec (0.17307) | 
               |  | cut (0.169924) | 
               |  | nco (0.161734) | 
               |  | bfe (0.149858) | 
               |  | fat (0.147427) | 
               |  | hyp (0.142837) | 
               |  | pty (0.142714) | 
               |  | lnt (0.142308) | 
               |  | nca (0.136874) | 
               |  | pla (0.133672) | 
               |  | lyg (0.133103) | 
               |  | nmm (0.132802) | 
               |  | cov (0.132153) | 
               |  | cly (0.120642) | 
               |  | pgl (0.118483) | 
               |  | ebs (0.118301) | 
               |  | ldo (0.0970026) |