Non-Coding RNA Search

Ss1.1-rhlv10b_n3.5

Sequence:


               
               TCTTCCCTCTCATCTTCGAATACAGTTAGGCTGGGCACAGTGCCAACAGGATCAAGGTTA
ATGGTCTGACTCTCAAATGGATTGATTCTGTACCCAAACCATCTCTGTTTCCAGATGTGT
GTCTGACAGCCACGTGCTGCTGCACCTGAAGGGATCTGTCATGAGAACATGGACACTCTG
GTCCAATGATTATAGCTACTGTCCCCTGGATGATTATTTTTGCGTGGCACTGCTAAGGAG
CTTACGTTCATGTTTAATCTTCCCAACATCCCGGGGTGATTAATATTACTCCCATTTATT
CGCTGAGGCAACGGAGACATTAAGTAACCCGGCTAAATTCATTCACAAATGACAGAACTG
AGATTTGAATTTGGCGCTGGTGGACTCCAGAATCCATACTCATAACTGCTTTTGTTGGAA
AAATAACACAATATACATGGCAATCGGTCTGAATTCATTCACCTTCCTAAGTTCCTATTA
TCTGCTGTTCACTGCGCTGGGCTTCAGGAATACAAGAATAAAGAGAACACTGGCTATGCC
TTGGGTAGTTCATTTCAGGCCAACATTGTAGACAGGTGCATCCAGCATTCAACAGAATGC
TGTCAGTACAGACCCAGAAAGCCCTCTACCCACGAGTAAGAAGAGCGAACACACAGCTCT
GCCTGGGGACCTGGGGAACGATTCACAGAGATGGATTTGTGCTGGGTTTTGAAGAATGCA
TAGAAACTTTCTAGAAAAATAAGAGGACACATGTGGAGGCTCAGAAAGCCGAGGGAGCAG
GATGTGATCAGGAGGTGAAATCCATTCTCCCGGGGCGTAGATTGGTGAGAGGAAAGAGAG
GTTGGGGAAGCAGGCGATGGAGCCACGCAAGAGTACATTTGGGTCACGCAGCCATGGTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTTCCCTCTCATCTTCGAATACAGTTAGGCTGGGCACAGTGCCAACAGGATCAAGGTTA
ATGGTCTGACTCTCAAATGGATTGATTCTGTACCCAAACCATCTCTGTTTCCAGATGTGT
GTCTGACAGCCACGTGCTGCTGCACCTGAAGGGATCTGTCATGAGAACATGGACACTCTG
GTCCAATGATTATAGCTACTGTCCCCTGGATGATTATTTTTGCGTGGCACTGCTAAGGAG
CTTACGTTCATGTTTAATCTTCCCAACATCCCGGGGTGATTAATATTACTCCCATTTATT
CGCTGAGGCAACGGAGACATTAAGTAACCCGGCTAAATTCATTCACAAATGACAGAACTG
AGATTTGAATTTGGCGCTGGTGGACTCCAGAATCCATACTCATAACTGCTTTTGTTGGAA
AAATAACACAATATACATGGCAATCGGTCTGAATTCATTCACCTTCCTAAGTTCCTATTA
TCTGCTGTTCACTGCGCTGGGCTTCAGGAATACAAGAATAAAGAGAACACTGGCTATGCC
TTGGGTAGTTCATTTCAGGCCAACATTGTAGACAGGTGCATCCAGCATTCAACAGAATGC
TGTCAGTACAGACCCAGAAAGCCCTCTACCCACGAGTAAGAAGAGCGAACACACAGCTCT
GCCTGGGGACCTGGGGAACGATTCACAGAGATGGATTTGTGCTGGGTTTTGAAGAATGCA
TAGAAACTTTCTAGAAAAATAAGAGGACACATGTGGAGGCTCAGAAAGCCGAGGGAGCAG
GATGTGATCAGGAGGTGAAATCCATTCTCCCGGGGCGTAGATTGGTGAGAGGAAAGAGAG
GTTGGGGAAGCAGGCGATGGAGCCACGCAAGAGTACATTTGGGTCACGCAGCCATGGTCC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-610, gnl|bosTau2|chr17 (7464696-7465306)
               

               
               1-610, gnl|Hg17|chr8 (124761994-124761030)
               

               
               1-610, gnl|Mm7|chr15 (58406500-58405949)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-610, gnl|bosTau2|chr17 (7464696-7465306)
               

               
               1-610, gnl|Hg17|chr8 (124761994-124761030)
               

               
               1-610, gnl|Mm7|chr15 (58406500-58405949)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               hlv (0.139256)
               

               
               spc (0.113366)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hlv (0.139256)
               

               
               spc (0.113366)

	1-610, gnl\|bosTau2\|chr17 (7464696-7465306)
	1-610, gnl\|Hg17\|chr8 (124761994-124761030)
	1-610, gnl\|Mm7\|chr15 (58406500-58405949)