Non-Coding RNA Search

Ss1.1-rhlv11b_d3.5

Sequence:


               
               CAAAAAAGGTGCTGTCACTTTAAGTTCTGGACTGGGGCCGGGGGGGGGGGGGCGTCTGTA
ATTGTAAACAGTAAAGCATTGTGTTTGTTTGTCTATTTGTAAAGCAACCACCTTCCTTAC
TGGAAGGAGAAAAAAAACTGGGGGGTACATACGTGTAAATACTTGCTGCAGCATTTAATA
TGTTTAATTTTATGTGAAGCTTTTTGTTGCATCGTGAACACATTTATTGTTACCGATGGA
CAATGAGTTCATTAAGACGGTTCAACTAGGTCAGATTTTTACATCTCTTTCTAGCAAGAA
GAGACAAGATTTTGTGCATTTGTACAAATGTTAATAATATCACTGCAATTCCAATATAAT
AAAGCACTCAAATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAAAAAGGTGCTGTCACTTTAAGTTCTGGACTGGGGCCGGGGGGGGGGGGGCGTCTGTA
ATTGTAAACAGTAAAGCATTGTGTTTGTTTGTCTATTTGTAAAGCAACCACCTTCCTTAC
TGGAAGGAGAAAAAAAACTGGGGGGTACATACGTGTAAATACTTGCTGCAGCATTTAATA
TGTTTAATTTTATGTGAAGCTTTTTGTTGCATCGTGAACACATTTATTGTTACCGATGGA
CAATGAGTTCATTAAGACGGTTCAACTAGGTCAGATTTTTACATCTCTTTCTAGCAAGAA
GAGACAAGATTTTGTGCATTTGTACAAATGTTAATAATATCACTGCAATTCCAATATAAT
AAAGCACTCAAATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               40-381, gnl|bosTau2|chr4 (38367563-38367902)
               

               
               40-381, gnl|Hg17|chr7 (28638412-28638751)
               

               
               40-381, gnl|Mm7|chr6 (53663380-53663737)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               40-381, gnl|bosTau2|chr4 (38367563-38367902)
               

               
               40-381, gnl|Hg17|chr7 (28638412-28638751)
               

               
               40-381, gnl|Mm7|chr6 (53663380-53663737)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               aor (0.195274)
               

               
               hlv (0.139256)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)
               

               
               hlv (0.139256)

	40-381, gnl\|bosTau2\|chr4 (38367563-38367902)
	40-381, gnl\|Hg17\|chr7 (28638412-28638751)
	40-381, gnl\|Mm7\|chr6 (53663380-53663737)