Non-Coding RNA Search

Ss1.1-rhlv16b_e4.5

Sequence:


               
               GGAGAAGATCAGCTCATGAGGGCAGCCCTGCTGTCAGGCTCTGACGGCAATATGTGGAAA
GCCCGGCAACCAAACTTCCTGGCCATGAAACAAAGTATCAAGTACACCCTCTTCCTGATG
CCCAGCTCTTCCCAGCAGGTGAGAATGCACAGTGGCACTAGATGGGAGAGGCCCCCTCAT
CTGATGTCATCTGAGATGCTGTTTGATGTTGCCCGGAGGTATGATGGTGCTGGTCTTAAT
ATGAGAGCAAAAAGAGTCTTGGAAGGACATGAAGCCCCCTAGTGGCGAGGAATGACCGCT
CAGCCCACACTGTTGAAAAGATGAGAACTTGTGGTTGGGTTTTTCTTTTCTAGCCTGGAA
AAAAGTTGTTGAAAGAAAGCGGGGTACCCGCCAGGTACTCTCTGCCTCTCTGCTGTGGGC
AGGTGATACCCTAGAGGCCCAGCTGTGCTGTCATGGGGTCCCCCTGGATCTTGCTGGTCC
CATCAACTCATGACTGGTTGCTCCTCCTCAAAATCAGGGTGAAAAAGTTCTGAGGTCCGT
GGATGAGAAGAGACGTGATGGCGTGATCTGAAATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGAAGATCAGCTCATGAGGGCAGCCCTGCTGTCAGGCTCTGACGGCAATATGTGGAAA
GCCCGGCAACCAAACTTCCTGGCCATGAAACAAAGTATCAAGTACACCCTCTTCCTGATG
CCCAGCTCTTCCCAGCAGGTGAGAATGCACAGTGGCACTAGATGGGAGAGGCCCCCTCAT
CTGATGTCATCTGAGATGCTGTTTGATGTTGCCCGGAGGTATGATGGTGCTGGTCTTAAT
ATGAGAGCAAAAAGAGTCTTGGAAGGACATGAAGCCCCCTAGTGGCGAGGAATGACCGCT
CAGCCCACACTGTTGAAAAGATGAGAACTTGTGGTTGGGTTTTTCTTTTCTAGCCTGGAA
AAAAGTTGTTGAAAGAAAGCGGGGTACCCGCCAGGTACTCTCTGCCTCTCTGCTGTGGGC
AGGTGATACCCTAGAGGCCCAGCTGTGCTGTCATGGGGTCCCCCTGGATCTTGCTGGTCC
CATCAACTCATGACTGGTTGCTCCTCCTCAAAATCAGGGTGAAAAAGTTCTGAGGTCCGT
GGATGAGAAGAGACGTGATGGCGTGATCTGAAATAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               3-576, gnl|bosTau2|chr16 (10604381-10603832)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-576, gnl|bosTau2|chr16 (10604381-10603832)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fbs (0.175346)
               

               
               fhi (0.169578)
               

               
               hlv (0.139256)
               

               
               cly (0.120642)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               fhi (0.169578)
               

               
               hlv (0.139256)
               

               
               cly (0.120642)