Ss1.1-rhlv24b_l3.5
|
GGGGCTGGGGGGGCGGCAGCAGTGGGGCGGAGAGCCGGGGTGCGCACCTGGGCCCCCCTG
GCCATGGCGGCGAAGGTGGACCTGAGCACCTCCACCGACTGGAAGGAGGCAAAATCCTTT
CTGAAGGGCCTGAGTGACAAGCAGCGGGAGGAACATTACTTCTGCCGGGACTTCATCAGG
CTAAAGAAGATCCCGACTTGGAAGGAGACGGCGAAAGGGATAACGGCGAAGGTGGAGGAG
CCCAAGTATAAGAAGGACAAGCAGCTCAACGAGAAGATCTCCCTGTTCCGAGGCGACATC
ACCAAACTGGAGGTGGACGCCATCGTCAACGCCGCCAACAGCTCCCTGCTCGGAGGTGGC
GGTGTGGACGGCTGCATCCACCGGGCCGCTGGACCCCTGCTCACCGACGAGTGCAGGACT
CTGCAGAGCTGCGAGACCGGCAAGGCCAAGATCACCTGCGGCTATCGGCTGCCAGCCAAA
TATGTCATCCACACGGTGGGACCCATCGCCCACGGAGAGCCCAGCGCCAGCCAGGCTGCC
GAGCTCCGCAGCTGCTACCTGAGCAGCCTCGACCTGTTGCTGGAGCACCGGCTCCGCTCC
GCGGCTTTCCCCTGCATCTCCACGGGAGTGTTTGGCTACCCCAATGAGGCGGCGGCCGAG
GTAGTGCTGACCGCGTTGCGGGAGTGGCTGGAGCAGCACAAGGACAAGGTGGACCGGCTG
ATCATCTGCGTGTTCCTGGAGAAGGACGAGAACATCTACCGGCAACGGCTCCCCTACTAC
TTCCCGGTTGCCTGACGGCACCCCGCCACCTACCCTGACCAGGACTGACTCGCCCGGGCC
TGCCGGACCTCGCTCCCAGCTCTAAGAAGTCGAGGAAGCCTGCATCTGGGCCTGGCCTGG
CCACCCCGTTCTGTCCCTCTGCTTCCTGCCCCCTCAGGAGCCTCCTAATAAAGACCATGA
GTGTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGGGCTGGGGGGGCGGCAGCAGTGGGGCGGAGAGCCGGGGTGCGCACCTGGGCCCCCCTG
GCCATGGCGGCGAAGGTGGACCTGAGCACCTCCACCGACTGGAAGGAGGCAAAATCCTTT
CTGAAGGGCCTGAGTGACAAGCAGCGGGAGGAACATTACTTCTGCCGGGACTTCATCAGG
CTAAAGAAGATCCCGACTTGGAAGGAGACGGCGAAAGGGATAACGGCGAAGGTGGAGGAG
CCCAAGTATAAGAAGGACAAGCAGCTCAACGAGAAGATCTCCCTGTTCCGAGGCGACATC
ACCAAACTGGAGGTGGACGCCATCGTCAACGCCGCCAACAGCTCCCTGCTCGGAGGTGGC
GGTGTGGACGGCTGCATCCACCGGGCCGCTGGACCCCTGCTCACCGACGAGTGCAGGACT
CTGCAGAGCTGCGAGACCGGCAAGGCCAAGATCACCTGCGGCTATCGGCTGCCAGCCAAA
TATGTCATCCACACGGTGGGACCCATCGCCCACGGAGAGCCCAGCGCCAGCCAGGCTGCC
GAGCTCCGCAGCTGCTACCTGAGCAGCCTCGACCTGTTGCTGGAGCACCGGCTCCGCTCC
GCGGCTTTCCCCTGCATCTCCACGGGAGTGTTTGGCTACCCCAATGAGGCGGCGGCCGAG
GTAGTGCTGACCGCGTTGCGGGAGTGGCTGGAGCAGCACAAGGACAAGGTGGACCGGCTG
ATCATCTGCGTGTTCCTGGAGAAGGACGAGAACATCTACCGGCAACGGCTCCCCTACTAC
TTCCCGGTTGCCTGACGGCACCCCGCCACCTACCCTGACCAGGACTGACTCGCCCGGGCC
TGCCGGACCTCGCTCCCAGCTCTAAGAAGTCGAGGAAGCCTGCATCTGGGCCTGGCCTGG
CCACCCCGTTCTGTCCCTCTGCTTCCTGCCCCCTCAGGAGCCTCCTAATAAAGACCATGA
GTGTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
|
476-604, gnl|bosTau2|chr29 (35142372-35142244) |
|
476-604, gnl|canFam2|chr18 (56059730-56058138) |
|
476-604, gnl|hg17|chr11 (63522372-63523895) |
|
476-604, gnl|Hg17|chr11 (63523817-63523689) |
|
476-604, gnl|mm7|chr19 (7018157-7016612) |
|
476-604, gnl|Mm7|chr19 (7016646-7016772) |
|
476-604, gnl|panTro1|chr9 (64505330-64506854) |
|
476-604, gnl|rheMac2|chr14 (10437000-10435480) |
|
476-604, gnl|rn3|chr1 (210030101-210028548) |
| |
|
707-858, gnl|bosTau2|chr29 (35141521-35141366) |
|
707-858, gnl|canFam2|chr18 (56059730-56058138) |
|
707-858, gnl|hg17|chr11 (63522372-63523895) |
|
707-858, gnl|Hg17|chr11 (63523086-63522939) |
|
707-858, gnl|mm7|chr19 (7018157-7016612) |
|
707-858, gnl|Mm7|chr19 (7017391-7017544) |
|
707-858, gnl|panTro1|chr9 (64505330-64506854) |
|
707-858, gnl|rheMac2|chr14 (10437000-10435480) |
|
707-858, gnl|rn3|chr1 (210030101-210028548) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
476-604, gnl|bosTau2|chr29 (35142372-35142244) |
|
476-604, gnl|canFam2|chr18 (56059730-56058138) |
|
476-604, gnl|hg17|chr11 (63522372-63523895) |
|
476-604, gnl|Hg17|chr11 (63523817-63523689) |
|
476-604, gnl|mm7|chr19 (7018157-7016612) |
|
476-604, gnl|Mm7|chr19 (7016646-7016772) |
|
476-604, gnl|panTro1|chr9 (64505330-64506854) |
|
476-604, gnl|rheMac2|chr14 (10437000-10435480) |
|
476-604, gnl|rn3|chr1 (210030101-210028548) |
| |
|
707-858, gnl|bosTau2|chr29 (35141521-35141366) |
|
707-858, gnl|canFam2|chr18 (56059730-56058138) |
|
707-858, gnl|hg17|chr11 (63522372-63523895) |
|
707-858, gnl|Hg17|chr11 (63523086-63522939) |
|
707-858, gnl|mm7|chr19 (7018157-7016612) |
|
707-858, gnl|Mm7|chr19 (7017391-7017544) |
|
707-858, gnl|panTro1|chr9 (64505330-64506854) |
|
707-858, gnl|rheMac2|chr14 (10437000-10435480) |
|
707-858, gnl|rn3|chr1 (210030101-210028548) |
|
hlv (0.696282) |
|
ese (0.632511) |
|
mas (0.630915) |
|
nms (0.213858) |
|
ill (0.175593) |
|
eye (0.170503) |
|
cli (0.152812) |
|
nmm (0.132802) |
|
cov (0.132153) |
|
eru (0.120048) |
|
ldo (0.0970026) |
|
hlv (0.696282) |
|
ese (0.632511) |
|
mas (0.630915) |
|
nms (0.213858) |
|
ill (0.175593) |
|
eye (0.170503) |
|
cli (0.152812) |
|
nmm (0.132802) |
|
cov (0.132153) |
|
eru (0.120048) |
|
ldo (0.0970026) |
