Ss1.1-rhlv26b_a24.5
|
AGACGGTCTGGACGAGGCACGCTGCCGGGGAGCTCAGTCTCCGCGGTGTCTGAGTTCAGC
CCTCATGGGGGCAGAAACCGAAGGAAAATCACTTTCCCCTTTGAGGGAGTTTGTAAAAGA
AGGAAACTCTGAGCTCAACCAGGCAGCACCTCGCAGGCCTGTGTTTTTTGCTCTGTGTGT
TGCGGGCTTGTTATAATTCACAGGCACCGACTGTTCGACTCCAAGCGTCCGTGTGGAAGA
ATTGGGTCAGAACGTCAGATGTTGTGTCTAGCTCCCGCCAAGGATCTAAGTCCTTGGAAG
CTTCTGGAGGCTGGTATTATGCCCATGGACTGTCGCCTGTCACCAGCCCCGTCCAGACTG
CAAGGTGGGGTTTTTAGAATTAGTGGCCGACCGGGGGAACTTCAGTAGGTTTGCTTTGCA
AGTGGCCGTCTCGGGGGAGAAGCTGAAACGTCCAAGACAGTCGGCCCCGTCCTTTTGAAG
GAGACTCCCTGGGCCCATGTCCTGGGCCGCAGGCCCTCGCTCAGAACCAGGTCGCGTTGC
CTTTTTCACCCTCACAAACATTGTGAAACTGGAACCGTTTTTCTTTCGGGGATGCACATG
ATAAGCCCTTGAAGTCAGGGACCGCCTCTAATGTACACGACACGTCAGGCCCACGTGGTC
CTGCCCCCCCCCCAAGTGTTGGTTTCCTTCTCATTTCGCCCCATCGTGTTCTGAGTTTTT
TCATCCCGTCTGTAGGCTCACTCAGCCCGCAGCTTACGTGTGTGCTTTTTTCTATGAAAA
ATGATGTATTTTACTACTTCCTACGTACAAGAGTTTGTTGTAAAGTGTGTGTGTGCTTCG
CATCCACAGGGACCACGTTGCTGTTGTCTCAATAAAACCGGTTTGATTTCTAAAAAAAAA
AAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGACGGTCTGGACGAGGCACGCTGCCGGGGAGCTCAGTCTCCGCGGTGTCTGAGTTCAGC
CCTCATGGGGGCAGAAACCGAAGGAAAATCACTTTCCCCTTTGAGGGAGTTTGTAAAAGA
AGGAAACTCTGAGCTCAACCAGGCAGCACCTCGCAGGCCTGTGTTTTTTGCTCTGTGTGT
TGCGGGCTTGTTATAATTCACAGGCACCGACTGTTCGACTCCAAGCGTCCGTGTGGAAGA
ATTGGGTCAGAACGTCAGATGTTGTGTCTAGCTCCCGCCAAGGATCTAAGTCCTTGGAAG
CTTCTGGAGGCTGGTATTATGCCCATGGACTGTCGCCTGTCACCAGCCCCGTCCAGACTG
CAAGGTGGGGTTTTTAGAATTAGTGGCCGACCGGGGGAACTTCAGTAGGTTTGCTTTGCA
AGTGGCCGTCTCGGGGGAGAAGCTGAAACGTCCAAGACAGTCGGCCCCGTCCTTTTGAAG
GAGACTCCCTGGGCCCATGTCCTGGGCCGCAGGCCCTCGCTCAGAACCAGGTCGCGTTGC
CTTTTTCACCCTCACAAACATTGTGAAACTGGAACCGTTTTTCTTTCGGGGATGCACATG
ATAAGCCCTTGAAGTCAGGGACCGCCTCTAATGTACACGACACGTCAGGCCCACGTGGTC
CTGCCCCCCCCCCAAGTGTTGGTTTCCTTCTCATTTCGCCCCATCGTGTTCTGAGTTTTT
TCATCCCGTCTGTAGGCTCACTCAGCCCGCAGCTTACGTGTGTGCTTTTTTCTATGAAAA
ATGATGTATTTTACTACTTCCTACGTACAAGAGTTTGTTGTAAAGTGTGTGTGTGCTTCG
CATCCACAGGGACCACGTTGCTGTTGTCTCAATAAAACCGGTTTGATTTCTAAAAAAAAA
AAAAAAAAAAAA
|
|
1-598, gnl|bosTau2|chr18 (11839117-11838499) |
| |
|
674-895, gnl|bosTau2|chr18 (11838357-11838140) |
|
674-895, gnl|canFam2|chr5 (70644090-70643634) |
|
674-895, gnl|dasNov1|scaffold_214340 (39909-40389) |
|
674-895, gnl|hg17|chr16 (83500105-83500572) |
|
674-895, gnl|Hg17|chr16 (83500315-83500550) |
|
674-895, gnl|loxAfr1|scaffold_10800 (6472-6018) |
|
674-895, gnl|mm7|chr8 (118687904-118688339) |
|
674-895, gnl|Mm7|chr8 (118688083-118688317) |
|
674-895, gnl|monDom2|scaffold_23 (15488119-15487650) |
|
674-895, gnl|panTro1|chr18_random (41512254-41512720) |
|
674-895, gnl|rheMac2|chr20 (83043099-83043565) |
|
674-895, gnl|rn3|chr19 (50382490-50382932) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-598, gnl|bosTau2|chr18 (11839117-11838499) |
| |
|
674-895, gnl|bosTau2|chr18 (11838357-11838140) |
|
674-895, gnl|canFam2|chr5 (70644090-70643634) |
|
674-895, gnl|dasNov1|scaffold_214340 (39909-40389) |
|
674-895, gnl|hg17|chr16 (83500105-83500572) |
|
674-895, gnl|Hg17|chr16 (83500315-83500550) |
|
674-895, gnl|loxAfr1|scaffold_10800 (6472-6018) |
|
674-895, gnl|mm7|chr8 (118687904-118688339) |
|
674-895, gnl|Mm7|chr8 (118688083-118688317) |
|
674-895, gnl|monDom2|scaffold_23 (15488119-15487650) |
|
674-895, gnl|panTro1|chr18_random (41512254-41512720) |
|
674-895, gnl|rheMac2|chr20 (83043099-83043565) |
|
674-895, gnl|rn3|chr19 (50382490-50382932) |
|
sme (0.305437) |
|
fat (0.294855) |
|
cmu (0.186393) |
|
sto (0.179824) |
|
cut (0.169924) |
|
nco (0.161734) |
|
cli (0.152812) |
|
lnt (0.142308) |
|
hlv (0.139256) |
|
nca (0.136874) |
|
ova (0.129132) |
|
bla (0.124347) |
|
sme (0.305437) |
|
fat (0.294855) |
|
cmu (0.186393) |
|
sto (0.179824) |
|
cut (0.169924) |
|
nco (0.161734) |
|
cli (0.152812) |
|
lnt (0.142308) |
|
hlv (0.139256) |
|
nca (0.136874) |
|
ova (0.129132) |
|
bla (0.124347) |
