Non-Coding RNA Search

Ss1.1-rhlv26b_l5.5

Sequence:


               
               AGAGCAGCTTAGGCTGGTCGGCCTATAATCCAGATGTGTGCAGTCTGCCAGCAGTACCTG
ACATGCTGGGCACCTGGCCAGCCACAAGTGGGGCCTGGGGATGGATGCAGCCCTGTATAC
CGCATGAAAGAAGTCAGAGCTAGAGGGGGCCGCCTACCCGTCCCCCTGATGCAGACGTAC
AACTTCAGGTATCAGCCCTGAGGCAGGCACTTCTGCTGGGATGCTAGTGTGACTTGTTCT
CAGAGGGAATGTGAGAAGTCAGTCAGCTGTGGGAAACCAACCCAGACAAGAAGATCCCCC
ATTCTTCACCTGAATGGGAAGGACTAAGAGTCACGTTTGCTTTCTTTCAAGACTTAAGAG
CCACTATCTGTGCAATTGTATTTGGCTTTTTTTGCACTAATTTCGTTTCAATGCTGGTAA
TTGAAACCATTTTAATGTATTTGGTTGTATTCACTTTGTGTCCTTCCAAAAATGTGTACA
AACCATGCTTTCAATGTTGGCCTCCAAGTTTTTATAAGACGTTTTTGTACTGACTTGCTC
TGTGTTTTTCCTTATTTCAGTGTCTAAAGTCTGGACTGTGCCATTGGAGGCTAAGTTGGT
GTCCCCACCAACACCCCCACATTCACAGGAAAGAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAGCAGCTTAGGCTGGTCGGCCTATAATCCAGATGTGTGCAGTCTGCCAGCAGTACCTG
ACATGCTGGGCACCTGGCCAGCCACAAGTGGGGCCTGGGGATGGATGCAGCCCTGTATAC
CGCATGAAAGAAGTCAGAGCTAGAGGGGGCCGCCTACCCGTCCCCCTGATGCAGACGTAC
AACTTCAGGTATCAGCCCTGAGGCAGGCACTTCTGCTGGGATGCTAGTGTGACTTGTTCT
CAGAGGGAATGTGAGAAGTCAGTCAGCTGTGGGAAACCAACCCAGACAAGAAGATCCCCC
ATTCTTCACCTGAATGGGAAGGACTAAGAGTCACGTTTGCTTTCTTTCAAGACTTAAGAG
CCACTATCTGTGCAATTGTATTTGGCTTTTTTTGCACTAATTTCGTTTCAATGCTGGTAA
TTGAAACCATTTTAATGTATTTGGTTGTATTCACTTTGTGTCCTTCCAAAAATGTGTACA
AACCATGCTTTCAATGTTGGCCTCCAAGTTTTTATAAGACGTTTTTGTACTGACTTGCTC
TGTGTTTTTCCTTATTTCAGTGTCTAAAGTCTGGACTGTGCCATTGGAGGCTAAGTTGGT
GTCCCCACCAACACCCCCACATTCACAGGAAAGAGC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               223-578, gnl|bosTau2|chr8 (20223450-20223097)
               

               
               223-578, gnl|Hg17|chr2 (101082527-101082137)
               

               
               223-578, gnl|Mm7|chr1 (39613546-39613218)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               223-578, gnl|bosTau2|chr8 (20223450-20223097)
               

               
               223-578, gnl|Hg17|chr2 (101082527-101082137)
               

               
               223-578, gnl|Mm7|chr1 (39613546-39613218)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

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               fcc (0.197785)
               

               
               sag (0.182715)
               

               
               hlv (0.139256)
               

               
               jca (0.11396)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               sag (0.182715)
               

               
               hlv (0.139256)
               

               
               jca (0.11396)

	223-578, gnl\|bosTau2\|chr8 (20223450-20223097)
	223-578, gnl\|Hg17\|chr2 (101082527-101082137)
	223-578, gnl\|Mm7\|chr1 (39613546-39613218)