Non-Coding RNA Search

Ss1.1-rhlv28b_a22.5

Sequence:


               
               GGAAGGACTCGCCATGTTTACTGGAGAAGAAGAAGTCTTTGCATTTCAGCGCACAATTTC
CCGACTCACAGAAATGCAGACTGAACAGTACTGGAATGAAGGGGACAGAAGCAAGAAGTA
ATCATCACTTTCACATGAATAAAACTGGGCAAATGATTGCCGCAGGGAGAACTCTTTATT
ATGGGACTTGAAGGAATCATTTTCTCATCATTAATTATGCACTTTGTCCTCTGGACCATT
TTTATCTAAAATTGCTGTCAAAGATGTAGTGGATTAGCAGGACTTGATGTCCAGCAGACA
TGCAGTTTCCTGAAAAAAAAAAAAAATCAAGGATCATGATGCCATAGAATAAGGAAGAAG
GCTGTCAAATTCCAATCGACAGGAAGTTTCCCCCAACTCTGACAGCCAGGAGGAGGACAG
ACACCAGGAATGGGGACCAATGAGAGGGTATCAGGAGAGGCAGAGTCCTGGACATGCCAA
GCAACAGAGTGGACTCCTGCTCAGGTGAGGCCTCGGGACCCCAGGGACCATGGCTCCTTC
CTGCTACTCCCTTGCATTTGCTCGGGTCACAGGATGTCACCCCCACCCATGCCTCAGCTT
CTGCAGTACCATGGGCCCAACAATAAAGAGGGAAGAACGCCTGATGAACCTACTTAACTA
AAATCCAGTTTGTCCTCTATCAAAGTCTATCCCTGACTCATTCAGATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAGGACTCGCCATGTTTACTGGAGAAGAAGAAGTCTTTGCATTTCAGCGCACAATTTC
CCGACTCACAGAAATGCAGACTGAACAGTACTGGAATGAAGGGGACAGAAGCAAGAAGTA
ATCATCACTTTCACATGAATAAAACTGGGCAAATGATTGCCGCAGGGAGAACTCTTTATT
ATGGGACTTGAAGGAATCATTTTCTCATCATTAATTATGCACTTTGTCCTCTGGACCATT
TTTATCTAAAATTGCTGTCAAAGATGTAGTGGATTAGCAGGACTTGATGTCCAGCAGACA
TGCAGTTTCCTGAAAAAAAAAAAAAATCAAGGATCATGATGCCATAGAATAAGGAAGAAG
GCTGTCAAATTCCAATCGACAGGAAGTTTCCCCCAACTCTGACAGCCAGGAGGAGGACAG
ACACCAGGAATGGGGACCAATGAGAGGGTATCAGGAGAGGCAGAGTCCTGGACATGCCAA
GCAACAGAGTGGACTCCTGCTCAGGTGAGGCCTCGGGACCCCAGGGACCATGGCTCCTTC
CTGCTACTCCCTTGCATTTGCTCGGGTCACAGGATGTCACCCCCACCCATGCCTCAGCTT
CTGCAGTACCATGGGCCCAACAATAAAGAGGGAAGAACGCCTGATGAACCTACTTAACTA
AAATCCAGTTTGTCCTCTATCAAAGTCTATCCCTGACTCATTCAGATA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               2-277, gnl|bosTau2|chr11 (81381960-81382237)
               

               
               2-277, gnl|Hg17|chr6 (108950202-108950479)
               

               
               2-277, gnl|Mm7|chr10 (42124268-42123987)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-277, gnl|bosTau2|chr11 (81381960-81382237)
               

               
               2-277, gnl|Hg17|chr6 (108950202-108950479)
               

               
               2-277, gnl|Mm7|chr10 (42124268-42123987)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               hlv (0.139256)
               

               
               ldo (0.0970026)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hlv (0.139256)
               

               
               ldo (0.0970026)

	2-277, gnl\|bosTau2\|chr11 (81381960-81382237)
	2-277, gnl\|Hg17\|chr6 (108950202-108950479)
	2-277, gnl\|Mm7\|chr10 (42124268-42123987)