Non-Coding RNA Search

Ss1.1-rhlv28b_c24.5

Sequence:


               
               AAGAACCAAAAAGCAGTTAAAGTGCCCCATCTGCAGATAGGAGGATGAGGACTGAGCAGG
GGAGGGACGTTGTTTTCCCAAGGCCACATGGTGAGTCAGTGGCAGAGCCAGGACCGGAAG
ATGGGAAATCCTCATGTCAGCCCAGCAAACCCTCATTCCTCAAGGCTGAAACCTAGGTCA
CCTCCCCAGGTTTTCCCAGGAGAGCAAGGTAGGGCGTACAGGATTCCGAGGTGGATGCTG
GGGGATCGGGGTGGGGGTCTTTACTGAATAATTCTCCAGGGGGAATTATCCATGTCAATG
ACTATCCCCAGGTGTCTCATGATGCTTGGTCAACTCTGGGGCATCGCTGCCTTTGTTTCT
GCCTCCTAGCCTAGTGCCTCCTTTCTTTCCCCACAGGATTGCATCAGGTGACCTCCCTGA
CAGGCCTCCGTGCCACCCCCTCCGGAAGACCTTTATGCCATCATTAGTGGTTAAGAAGCA
ACGAGCCAAAAACCTTTCAGTGTGTTGAGACCTCTTGGTGCAGGCAGGGACGTGACCCCG
GGTCAGCGGAGTGCAGTGAAGTCCTCCTCCTCGCCCTTTGCCCTGTTGCTGCTTCGGGAC
ACTGCCGGGAAAAGCTGCTGACCTCACCTTCCTCTCTGAGGCGAGGGCTGAGTTTCTCTG
AGCAGCCGAGGAGCCCTGGGCCCCTGCGAGGCCTCAGGTGCAGCAGCTCTCAGGCTCCTC
CCTGACTGCCAGAAATCCCTGGGCTTAGGCAATGTGAACTTATTTATCTGGCACCCATGG
AGTGTGTTTGGCACGGCGATCTATCGGCACCCAGCATGTCGCAGATGTATATTTATGCAA
AATGATATATATGTATATATCTGTGGGACTGTCAGTGTTGTGAACTGGCTGGATCCAACT
GGATCCAACCATCTTTCTGGAATCATGCACTCAAAGAGTCGGTCTTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAACCAAAAAGCAGTTAAAGTGCCCCATCTGCAGATAGGAGGATGAGGACTGAGCAGG
GGAGGGACGTTGTTTTCCCAAGGCCACATGGTGAGTCAGTGGCAGAGCCAGGACCGGAAG
ATGGGAAATCCTCATGTCAGCCCAGCAAACCCTCATTCCTCAAGGCTGAAACCTAGGTCA
CCTCCCCAGGTTTTCCCAGGAGAGCAAGGTAGGGCGTACAGGATTCCGAGGTGGATGCTG
GGGGATCGGGGTGGGGGTCTTTACTGAATAATTCTCCAGGGGGAATTATCCATGTCAATG
ACTATCCCCAGGTGTCTCATGATGCTTGGTCAACTCTGGGGCATCGCTGCCTTTGTTTCT
GCCTCCTAGCCTAGTGCCTCCTTTCTTTCCCCACAGGATTGCATCAGGTGACCTCCCTGA
CAGGCCTCCGTGCCACCCCCTCCGGAAGACCTTTATGCCATCATTAGTGGTTAAGAAGCA
ACGAGCCAAAAACCTTTCAGTGTGTTGAGACCTCTTGGTGCAGGCAGGGACGTGACCCCG
GGTCAGCGGAGTGCAGTGAAGTCCTCCTCCTCGCCCTTTGCCCTGTTGCTGCTTCGGGAC
ACTGCCGGGAAAAGCTGCTGACCTCACCTTCCTCTCTGAGGCGAGGGCTGAGTTTCTCTG
AGCAGCCGAGGAGCCCTGGGCCCCTGCGAGGCCTCAGGTGCAGCAGCTCTCAGGCTCCTC
CCTGACTGCCAGAAATCCCTGGGCTTAGGCAATGTGAACTTATTTATCTGGCACCCATGG
AGTGTGTTTGGCACGGCGATCTATCGGCACCCAGCATGTCGCAGATGTATATTTATGCAA
AATGATATATATGTATATATCTGTGGGACTGTCAGTGTTGTGAACTGGCTGGATCCAACT
GGATCCAACCATCTTTCTGGAATCATGCACTCAAAGAGTCGGTCTTCC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-358, gnl|bosTau2|chr8 (30944685-30944337)
               

               
               1-358, gnl|Hg17|chr8 (22516231-22516545)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-358, gnl|bosTau2|chr8 (30944685-30944337)
               

               
               1-358, gnl|Hg17|chr8 (22516231-22516545)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               nlu (0.191681)
               

               
               hlv (0.139256)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)
               

               
               hlv (0.139256)

	1-358, gnl\|bosTau2\|chr8 (30944685-30944337)
	1-358, gnl\|Hg17\|chr8 (22516231-22516545)