Non-Coding RNA Search

Ss1.1-rhlv30b_b2.5

Sequence:


               
               CATGCTTTTCCATCCTTCCAGCTCAACTCAACTGTAGACCTAGAAAAGTATGCCATGGTA
TGGAGTGCAGTGCCAGCTTCTTCTACCACCCAAGAAAGAGCAACTCCACCAAAGCCCTAA
GCAGGGACTCTTTTCAACCACCTGACAATGAGGATTAGAGGCTGGAGCTAAGAAGAGGAT
TTGCATCTCAGCTCTCTTGAGCACAGAAAGTCTCAGCAAAGCCTCATAGAAGAAGGAGGT
GTTCCCTTCTCTTCATTACTGAGATATGGCCTGAGTTTCTGCTTCTCCCGACTGCTCACT
ACACATCCTTCCCCACCAGCCTAGGGCCTGGGCTTGGCATGGGATGACTCTAGGGCCAAG
AAGAGGCTGACGCAAGACCATCAAGCCCCAGCTGTCCTTCCTAAGTTCTCAATAAGCTCA
CTGAATCTTGCAGGTCAGCCCTGGCCCTTGGGTTCAAGTTTCTGTTTCCAACCTAATGAG
TTAGGTTTAGCCAGGTCTGACTACCAAGAATTATTCAAGAGGTGGTTGGCTCAGTCAAGT
GGGAGCTAACATATCCCCATTGCTCAAGGCACTTCTACAGAAGAAGCAGCATACAGCTCA
GTGTTGCTCAGAGGAAAGGAGGGAGCTATAACCAAGAGCATGATAAGAGCACTATATGGC
CTTCTCCTATAGAGACTGCCTGACCTAGAAGCCAAGTGAGAAACCTCTTGGGTTGGATGA
TTTCAGACTGAAATGAAGTAGACAGAAGATGAGTCTGGGTTAATGTGTATGGCTCTGAAC
ATTTAAAAGCCCACTCTTTTAAATACTTACTTCTTAGCTATACTCCCAAGACTAATCAGT
AGGAGGGGGCATTATTCAGTTCTGCCAAAAAAAAAAAAAGGAAGCACATGACTCTTGGAC
CTAAGGTCTGTATGTCAAGCAGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATGCTTTTCCATCCTTCCAGCTCAACTCAACTGTAGACCTAGAAAAGTATGCCATGGTA
TGGAGTGCAGTGCCAGCTTCTTCTACCACCCAAGAAAGAGCAACTCCACCAAAGCCCTAA
GCAGGGACTCTTTTCAACCACCTGACAATGAGGATTAGAGGCTGGAGCTAAGAAGAGGAT
TTGCATCTCAGCTCTCTTGAGCACAGAAAGTCTCAGCAAAGCCTCATAGAAGAAGGAGGT
GTTCCCTTCTCTTCATTACTGAGATATGGCCTGAGTTTCTGCTTCTCCCGACTGCTCACT
ACACATCCTTCCCCACCAGCCTAGGGCCTGGGCTTGGCATGGGATGACTCTAGGGCCAAG
AAGAGGCTGACGCAAGACCATCAAGCCCCAGCTGTCCTTCCTAAGTTCTCAATAAGCTCA
CTGAATCTTGCAGGTCAGCCCTGGCCCTTGGGTTCAAGTTTCTGTTTCCAACCTAATGAG
TTAGGTTTAGCCAGGTCTGACTACCAAGAATTATTCAAGAGGTGGTTGGCTCAGTCAAGT
GGGAGCTAACATATCCCCATTGCTCAAGGCACTTCTACAGAAGAAGCAGCATACAGCTCA
GTGTTGCTCAGAGGAAAGGAGGGAGCTATAACCAAGAGCATGATAAGAGCACTATATGGC
CTTCTCCTATAGAGACTGCCTGACCTAGAAGCCAAGTGAGAAACCTCTTGGGTTGGATGA
TTTCAGACTGAAATGAAGTAGACAGAAGATGAGTCTGGGTTAATGTGTATGGCTCTGAAC
ATTTAAAAGCCCACTCTTTTAAATACTTACTTCTTAGCTATACTCCCAAGACTAATCAGT
AGGAGGGGGCATTATTCAGTTCTGCCAAAAAAAAAAAAAGGAAGCACATGACTCTTGGAC
CTAAGGTCTGTATGTCAAGCAGCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               110-924, gnl|bosTau2|chr8 (27795554-27796365)
               

               
               110-924, gnl|Hg17|chr9 (34969153-34969974)
               

               
               110-924, gnl|Mm7|chr4 (42954413-42955376)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               110-924, gnl|bosTau2|chr8 (27795554-27796365)
               

               
               110-924, gnl|Hg17|chr9 (34969153-34969974)
               

               
               110-924, gnl|Mm7|chr4 (42954413-42955376)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hlv (0.139256)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hlv (0.139256)

	110-924, gnl\|bosTau2\|chr8 (27795554-27796365)
	110-924, gnl\|Hg17\|chr9 (34969153-34969974)
	110-924, gnl\|Mm7\|chr4 (42954413-42955376)