Non-Coding RNA Search

Ss1.1-rhlv31b_j24.5

Sequence:


               
               TTTAAACACGGACAAGTAGTCAACATATTAGGAAATTACAAAATTTTTTTTGCGCTATAA
TGGTCTGTGAGAGTGCTTAAGAAAAGAGCCTTCATCTTTTAGAGTTTTTTTTTGTTTTTT
TTTTTTGGCCAG------------TGGAAGTTCCTGGGCCAGGGATCTAGGCCATGACAC
AGCAGTGACCCAAGCTGCTTCAGTGACAAAACTGGATCCTTAACCTGCTGCACCACAAGG
GAACTCTCTTTTAGAGTATTTATGATGAAGTGCTATGTCTGGGATTTACTTCAAAATAAT
TCACTGAGGCAAAGAGGGGGTTGGGGTAAAGATGAAACAAGAAAGACTATGAATTGAATA
TTGTTGAAGTTCCATGATCAGAAGTGAGGGTTCATGATATTTGACTTTTGAATAGCGTTC
ATGTTTCTTTGGAATAAAAAGTAAAGGAGCCCGCGTTTTTCTTGTGTCCTGATAGCATGA
TTTCTCTAAGTGCTTTGCTGAAACTGCAGAATCATGACCCCATGTCATTTCTCTGATCTA
CTGTATAGTAACTGTGCAACAAAGAAATAAAAATAGCTGATATTTGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAAACACGGACAAGTAGTCAACATATTAGGAAATTACAAAATTTTTTTTGCGCTATAA
TGGTCTGTGAGAGTGCTTAAGAAAAGAGCCTTCATCTTTTAGAGTTTTTTTTTGTTTTTT
TTTTTTGGCCAG------------TGGAAGTTCCTGGGCCAGGGATCTAGGCCATGACAC
AGCAGTGACCCAAGCTGCTTCAGTGACAAAACTGGATCCTTAACCTGCTGCACCACAAGG
GAACTCTCTTTTAGAGTATTTATGATGAAGTGCTATGTCTGGGATTTACTTCAAAATAAT
TCACTGAGGCAAAGAGGGGGTTGGGGTAAAGATGAAACAAGAAAGACTATGAATTGAATA
TTGTTGAAGTTCCATGATCAGAAGTGAGGGTTCATGATATTTGACTTTTGAATAGCGTTC
ATGTTTCTTTGGAATAAAAAGTAAAGGAGCCCGCGTTTTTCTTGTGTCCTGATAGCATGA
TTTCTCTAAGTGCTTTGCTGAAACTGCAGAATCATGACCCCATGTCATTTCTCTGATCTA
CTGTATAGTAACTGTGCAACAAAGAAATAAAAATAGCTGATATTTGTT

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-434, gnl|bosTau2|chr13 (33859288-33859716)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-434, gnl|bosTau2|chr13 (33859288-33859716)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fat (0.147427)
               

               
               hlv (0.139256)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)
               

               
               hlv (0.139256)