Non-Coding RNA Search

Ss1.1-rhlv31b_l12.5

Sequence:


               
               AAAACATTTTACCTTTCTACTAAGCTCCCAAGCAATGATGATGATGCTATTCCAAGTGCA
TACTTTGAGTAGCAAGATTTTATTGTAGAGGAGTTATGTAAAGGATTCTTAAAAGAACTT
GAAGAATTTGATTGCCTGTTAGCTATTGGTAATTCTAGAGAACTCAAGATGAGTAGGATA
AATTCCCAGCAAAGAAACTGTAGTAACTTTAACTTTTTATTATATACTATGTCAGACATA
TTCAGTAATGGAGGAATTGTAAAATAAACCCCGCAAGTATTTACCCAACTTCTGTAATTA
TCAATTCAAAGTTAATTTTGTTTCTTCTATACTTCCTCTCCCCCTCCACTCAACTGCATT
GTAATAACATTTCCTTCTTTTACATATTAGAGATTTTAGAGTGTAATACCAGTCCTAGTA
TAAATTTAAGAACTTTTCCTTTTCTATGTGGCATTTCTACTTCTGGAAGTGAATTTTAAG
GGACTAAGACAAAAGGTGAAAGCCGTATAAATGAAGGCATTCATAATAATATGTTGATGT
TTGTGGAAGACAATTTAAGCAAACTAAAATGTCAGAATAAGAAGAAATAAGGTAAATCAT
GATTTAACTGTCCAATATACTATTTTACAGCAATTTAAAATGATTGTTTTGAAATCCATG
TGGTAACAATGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAACATTTTACCTTTCTACTAAGCTCCCAAGCAATGATGATGATGCTATTCCAAGTGCA
TACTTTGAGTAGCAAGATTTTATTGTAGAGGAGTTATGTAAAGGATTCTTAAAAGAACTT
GAAGAATTTGATTGCCTGTTAGCTATTGGTAATTCTAGAGAACTCAAGATGAGTAGGATA
AATTCCCAGCAAAGAAACTGTAGTAACTTTAACTTTTTATTATATACTATGTCAGACATA
TTCAGTAATGGAGGAATTGTAAAATAAACCCCGCAAGTATTTACCCAACTTCTGTAATTA
TCAATTCAAAGTTAATTTTGTTTCTTCTATACTTCCTCTCCCCCTCCACTCAACTGCATT
GTAATAACATTTCCTTCTTTTACATATTAGAGATTTTAGAGTGTAATACCAGTCCTAGTA
TAAATTTAAGAACTTTTCCTTTTCTATGTGGCATTTCTACTTCTGGAAGTGAATTTTAAG
GGACTAAGACAAAAGGTGAAAGCCGTATAAATGAAGGCATTCATAATAATATGTTGATGT
TTGTGGAAGACAATTTAAGCAAACTAAAATGTCAGAATAAGAAGAAATAAGGTAAATCAT
GATTTAACTGTCCAATATACTATTTTACAGCAATTTAAAATGATTGTTTTGAAATCCATG
TGGTAACAATGG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               5-656, gnl|bosTau2|chr1 (45090123-45090756)
               

               
               5-656, gnl|Hg17|chr3 (198286784-198286106)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-656, gnl|bosTau2|chr1 (45090123-45090756)
               

               
               5-656, gnl|Hg17|chr3 (198286784-198286106)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hlv (0.139256)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hlv (0.139256)

	5-656, gnl\|bosTau2\|chr1 (45090123-45090756)
	5-656, gnl\|Hg17\|chr3 (198286784-198286106)