Non-Coding RNA Search

Ss1.1-rhlv32b_c14.5

Sequence:


               
               CAGAAGCAATGGGGTGAAAACGTCTGTGTTCCCACACTCAACGGTAGCGGTCTCGTGTGA
CCTTTTTTCCATCACCTTATGTACGCAACAGGAGCTATTTCTTTTGTTTCCTTTCAGCTG
TTGTCCAACCATAGTGCTGACTGTACAGATAAGAGCCAGCAAGTGCCCTTAGGATGCCGC
ATGGAAAAAAGCAATTGTTGCAACTCCAGAGTCTGAGTATATTTATTAAGTAGTGCCGAG
GCTGAGAAGGAAGAGCCGGAGGGACAGAGTCAAGGGACAGATCCACGGGGTGGCAGCCTC
TGCACACGCCTTTTTTCACGGGCTTCCTGCAGCCCTGCCCACGCTTCACCAGGATGGAAA
CCAGAGTGGCGGGGGGAGAGGGGGTGCCCCAGCAGCTCTCTTTGAATAGCCGCCAAAGTC
CCTTTTAACCAGCTCCTTGTTCCCACTGTTTGCTAGGACCTGATGGGTGAATTCCTCAGC
TAGAATTAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGAAGCAATGGGGTGAAAACGTCTGTGTTCCCACACTCAACGGTAGCGGTCTCGTGTGA
CCTTTTTTCCATCACCTTATGTACGCAACAGGAGCTATTTCTTTTGTTTCCTTTCAGCTG
TTGTCCAACCATAGTGCTGACTGTACAGATAAGAGCCAGCAAGTGCCCTTAGGATGCCGC
ATGGAAAAAAGCAATTGTTGCAACTCCAGAGTCTGAGTATATTTATTAAGTAGTGCCGAG
GCTGAGAAGGAAGAGCCGGAGGGACAGAGTCAAGGGACAGATCCACGGGGTGGCAGCCTC
TGCACACGCCTTTTTTCACGGGCTTCCTGCAGCCCTGCCCACGCTTCACCAGGATGGAAA
CCAGAGTGGCGGGGGGAGAGGGGGTGCCCCAGCAGCTCTCTTTGAATAGCCGCCAAAGTC
CCTTTTAACCAGCTCCTTGTTCCCACTGTTTGCTAGGACCTGATGGGTGAATTCCTCAGC
TAGAATTAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-504, gnl|bosTau2|chr26 (22000897-22000428)
               

               
               1-504, gnl|Hg17|chr10 (116185824-116185325)
               

               
               1-504, gnl|Mm7|chr19 (56953025-56952583)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-504, gnl|bosTau2|chr26 (22000897-22000428)
               

               
               1-504, gnl|Hg17|chr10 (116185824-116185325)
               

               
               1-504, gnl|Mm7|chr19 (56953025-56952583)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               rec (0.17307)
               

               
               fhi (0.169578)
               

               
               csk (0.140746)
               

               
               hlv (0.139256)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.17307)
               

               
               fhi (0.169578)
               

               
               csk (0.140746)
               

               
               hlv (0.139256)

	1-504, gnl\|bosTau2\|chr26 (22000897-22000428)
	1-504, gnl\|Hg17\|chr10 (116185824-116185325)
	1-504, gnl\|Mm7\|chr19 (56953025-56952583)