Ss1.1-rhlv37b_f15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAAACCACTGGATACCCACAGACAGAAGGCTTGCTGGGCGACTGCATGCTCAAATATGG GAGGGAGCTCGGCGAAGGCTCCACCTTGGGCAATGCACTGATAGAAGTAGGTGAATCCAT GAAGCTAATGGCTGAGGTGAAAGACTCTCTTGATATTAATGTAAAGCAAACTTTTATTGA TCCACTTCAGTTACTACAAGACAAAGATTTAAAAGAGATTGGGCACCACCTGAAAAAGCT GGAAGGCCGCCGCCTGGATTACGATTATAAAAAGAAGCGAGTAGGTAAGATACCAGATGA AGAAGTCAGACAAGCAGTAGAAAAATTTGAAGAGTCAAAGGAGTTGGCTGAAAGAAGCAT GTTTAATTTTTTAGAAAATGATGTAGAACAAGTCAGCCAGTTGGCCGTGTTTATAGAGGC AGCTTTAGACTATCACAAACAATCCACAGAGATTCTGCAGGAGCTACAGAGCAAGCTACA GATGCGGATATCGGCTGCGTCCAATGTCCCCAAACGAGAATACAAGCCACGGCCCATAAA GAGGAGTCCTAGTGAGCTCAATGGGGTGTCCACCCCCTCTTCAGCAAAGACAACAGGTTC TAACATTCCCATGGACCAGCCCTGCTGTCGTGGTCTCTATGACTTTGAGCCAGAAAACCA AGGAGAACTAGGATTTAAAGAAGGGGACGTCATTACATTAACCAATCAAATAGATGAAAA CTGGTATGAAGGAATGCTTCATGGGGAATCTGGATTCTTCCCCATTAATTATGTTGAAGT GATTGTGCCTTTACCTCAGTAAAAGTGTATCTCTAACTTTGGACATTCTTTCATAACTGC AATGAATTCACACCAGTGTCCTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAAACCACTGGATACCCACAGACAGAAGGCTTGCTGGGCGACTGCATGCTCAAATATGG GAGGGAGCTCGGCGAAGGCTCCACCTTGGGCAATGCACTGATAGAAGTAGGTGAATCCAT GAAGCTAATGGCTGAGGTGAAAGACTCTCTTGATATTAATGTAAAGCAAACTTTTATTGA TCCACTTCAGTTACTACAAGACAAAGATTTAAAAGAGATTGGGCACCACCTGAAAAAGCT GGAAGGCCGCCGCCTGGATTACGATTATAAAAAGAAGCGAGTAGGTAAGATACCAGATGA AGAAGTCAGACAAGCAGTAGAAAAATTTGAAGAGTCAAAGGAGTTGGCTGAAAGAAGCAT GTTTAATTTTTTAGAAAATGATGTAGAACAAGTCAGCCAGTTGGCCGTGTTTATAGAGGC AGCTTTAGACTATCACAAACAATCCACAGAGATTCTGCAGGAGCTACAGAGCAAGCTACA GATGCGGATATCGGCTGCGTCCAATGTCCCCAAACGAGAATACAAGCCACGGCCCATAAA GAGGAGTCCTAGTGAGCTCAATGGGGTGTCCACCCCCTCTTCAGCAAAGACAACAGGTTC TAACATTCCCATGGACCAGCCCTGCTGTCGTGGTCTCTATGACTTTGAGCCAGAAAACCA AGGAGAACTAGGATTTAAAGAAGGGGACGTCATTACATTAACCAATCAAATAGATGAAAA CTGGTATGAAGGAATGCTTCATGGGGAATCTGGATTCTTCCCCATTAATTATGTTGAAGT GATTGTGCCTTTACCTCAGTAAAAGTGTATCTCTAACTTTGGACATTCTTTCATAACTGC AATGAATTCACACCAGTGTCCTCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 223-385, gnl|bosTau2|chr21 (16809945-16809783) | |
| 223-385, gnl|canFam2|chr3 (58166685-58166867) | |
| 223-385, gnl|danRer3|chr8 (13678949-13679129) | |
| 223-385, gnl|dasNov1|scaffold_274590 (1324-1506) | |
| 223-385, gnl|echTel1|scaffold_281421 (15121-14939) | |
| 223-385, gnl|fr1|chrUn (215851534-215851368) | |
| 223-385, gnl|galGal2|chr10 (12034064-12034247) | |
| 223-385, gnl|hg17|chr15 (82036326-82036509) | |
| 223-385, gnl|Hg17|chr15 (82036338-82036500) | |
| 223-385, gnl|loxAfr1|scaffold_78101 (7149-7332) | |
| 223-385, gnl|mm7|chr7 (78197789-78197971) | |
| 223-385, gnl|Mm7|chr7 (78197800-78197962) | |
| 223-385, gnl|monDom2|scaffold_45 (2600593-2600783) | |
| 223-385, gnl|oryCun1|scaffold_197760 (15160-14979) | |
| 223-385, gnl|panTro1|chr16 (82837775-82837958) | |
| 223-385, gnl|rheMac2|chr7 (62938411-62938228) | |
| 223-385, gnl|rn3|chr1 (138576507-138576689) | |
| 223-385, gnl|tetNig1|chrUn_random (32815886-32815709) | |
| 223-385, gnl|xenTro1|scaffold_789 (557914-557734) | |
| 593-863, gnl|bosTau2|chr21 (16773574-16773299) | |
| 593-863, gnl|Hg17|chr15 (82077834-82078106) | |
| 593-863, gnl|Mm7|chr7 (78228459-78228724) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 223-385, gnl|bosTau2|chr21 (16809945-16809783) | |
| 223-385, gnl|canFam2|chr3 (58166685-58166867) | |
| 223-385, gnl|danRer3|chr8 (13678949-13679129) | |
| 223-385, gnl|dasNov1|scaffold_274590 (1324-1506) | |
| 223-385, gnl|echTel1|scaffold_281421 (15121-14939) | |
| 223-385, gnl|fr1|chrUn (215851534-215851368) | |
| 223-385, gnl|galGal2|chr10 (12034064-12034247) | |
| 223-385, gnl|hg17|chr15 (82036326-82036509) | |
| 223-385, gnl|Hg17|chr15 (82036338-82036500) | |
| 223-385, gnl|loxAfr1|scaffold_78101 (7149-7332) | |
| 223-385, gnl|mm7|chr7 (78197789-78197971) | |
| 223-385, gnl|Mm7|chr7 (78197800-78197962) | |
| 223-385, gnl|monDom2|scaffold_45 (2600593-2600783) | |
| 223-385, gnl|oryCun1|scaffold_197760 (15160-14979) | |
| 223-385, gnl|panTro1|chr16 (82837775-82837958) | |
| 223-385, gnl|rheMac2|chr7 (62938411-62938228) | |
| 223-385, gnl|rn3|chr1 (138576507-138576689) | |
| 223-385, gnl|tetNig1|chrUn_random (32815886-32815709) | |
| 223-385, gnl|xenTro1|scaffold_789 (557914-557734) | |
| 593-863, gnl|bosTau2|chr21 (16773574-16773299) | |
| 593-863, gnl|Hg17|chr15 (82077834-82078106) | |
| 593-863, gnl|Mm7|chr7 (78228459-78228724) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fhi (0.169578) | |
| hlv (0.139256) | |
| ebs (0.118301) | |
| eje (0.0988338) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fhi (0.169578) | |
| hlv (0.139256) | |
| ebs (0.118301) | |
| eje (0.0988338) |