Non-Coding RNA Search

Ss1.1-rhyp01c_e13.5

Sequence:


               
               AGGATAATCCTTAATTTTCCACTAAAAATAACAAAGGATGTTAAGCTTCTCAGCAAAACG
TTTTAGGTTAAATCTGCTGTGGGTTAGATCAGTTTTAATGTGTTGCTTTCCGGTATCTGG
AATGTGGCAGTAGCTTTTTTATTTTTAACCCTCCTTAATCCTTATTCAATTCAGTGACTT
AAGGTTTGAGAGCTAAACACTGGGATTTTGGGGTAACAGACTGACAGTTTGGTTGTTTGC
GTAATTATAATCCGGCATGTACATAGAAAGGATATGGCTACCTTTGGTTAAATCTGCACT
TTCTAAATATCAAAAAAAGGGAAATGGAGTAAAAATCAATTTTGGTATAACCTGTTTGAA
ACATGAATTTTATTTGCTTAATATTAGGGCTTGGCCCCTTTTTCTGTAAGTCTCTGGGGA
TCCTGTGTAGAAGCTGTTCTCATTAAACACCAAACAGTTAAGTCCATTCTCTGGTACTAG
CTACAAATTCGGTTTCATATTCTACTTAACAATTTAAATAAACTGAAATATTTCTAGATG
AAAAAAAAAAAATCATATAAAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGATAATCCTTAATTTTCCACTAAAAATAACAAAGGATGTTAAGCTTCTCAGCAAAACG
TTTTAGGTTAAATCTGCTGTGGGTTAGATCAGTTTTAATGTGTTGCTTTCCGGTATCTGG
AATGTGGCAGTAGCTTTTTTATTTTTAACCCTCCTTAATCCTTATTCAATTCAGTGACTT
AAGGTTTGAGAGCTAAACACTGGGATTTTGGGGTAACAGACTGACAGTTTGGTTGTTTGC
GTAATTATAATCCGGCATGTACATAGAAAGGATATGGCTACCTTTGGTTAAATCTGCACT
TTCTAAATATCAAAAAAAGGGAAATGGAGTAAAAATCAATTTTGGTATAACCTGTTTGAA
ACATGAATTTTATTTGCTTAATATTAGGGCTTGGCCCCTTTTTCTGTAAGTCTCTGGGGA
TCCTGTGTAGAAGCTGTTCTCATTAAACACCAAACAGTTAAGTCCATTCTCTGGTACTAG
CTACAAATTCGGTTTCATATTCTACTTAACAATTTAAATAAACTGAAATATTTCTAGATG
AAAAAAAAAAAATCATATAAAAAC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               4-564, gnl|bosTau2|chr11 (54655466-54656037)
               

               
               4-564, gnl|Hg17|chr2 (26271413-26271959)
               

               
               4-564, gnl|Mm7|chr12 (3166483-3165914)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-564, gnl|bosTau2|chr11 (54655466-54656037)
               

               
               4-564, gnl|Hg17|chr2 (26271413-26271959)
               

               
               4-564, gnl|Mm7|chr12 (3166483-3165914)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fcc (0.39557)
               

               
               hyp (0.142837)
               

               
               ebs (0.118301)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.39557)
               

               
               hyp (0.142837)
               

               
               ebs (0.118301)

	4-564, gnl\|bosTau2\|chr11 (54655466-54656037)
	4-564, gnl\|Hg17\|chr2 (26271413-26271959)
	4-564, gnl\|Mm7\|chr12 (3166483-3165914)