Non-Coding RNA Search

Ss1.1-rhyp01c_h18.5

Sequence:


               
               TTCTTGATCTCAACTTAGGCAGAAGTCACATATTCACCCAGGAGGGCCCATCTCAGGGGT
CTGCCCTGCCCCACCCCCGGCCCCGGCCCTGGGCCTATAGATGAGAGCCAGTGTCAGTGT
TTCTGAAGGGACCCTGGGGATCTGGTCCAAAGTACACACAGGGAGGCCTGCCATCCGTGA
CCCTGGCCCTTCACACAGCCTGGGCCAGGCAGGCCTCCACGAAAGCAACATTGGGGTCAT
CGCACTGGGCTTATTCAGACAGGCCCGGGGTGTATAAGGATGCCCTTTACAAACCCACCC
CCACCAGACCCAGAGGCCTCCCGGTATTGGCAGCCCCCGGCCGCCCGAGCCCCTAAGACA
GGCCCAGCTCAGCGGCCCAGCCCCAGAGTCCCGTCAGCTCGCCTGGGCTCCACATGCCCC
AGGGCTTCTCTGCTCATTGTTGAACTATTTATACAGCAGGTTTCGGATCAGGTTTCTCTA
CTAATAAGAATGCTAACGTGGTTGTGTAGATAATCAGCGAGGCCTTTATGCAGTTGACAC
CTTTCGCGTTATTAAAGGAAATAACAGTTCATGCGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCTTGATCTCAACTTAGGCAGAAGTCACATATTCACCCAGGAGGGCCCATCTCAGGGGT
CTGCCCTGCCCCACCCCCGGCCCCGGCCCTGGGCCTATAGATGAGAGCCAGTGTCAGTGT
TTCTGAAGGGACCCTGGGGATCTGGTCCAAAGTACACACAGGGAGGCCTGCCATCCGTGA
CCCTGGCCCTTCACACAGCCTGGGCCAGGCAGGCCTCCACGAAAGCAACATTGGGGTCAT
CGCACTGGGCTTATTCAGACAGGCCCGGGGTGTATAAGGATGCCCTTTACAAACCCACCC
CCACCAGACCCAGAGGCCTCCCGGTATTGGCAGCCCCCGGCCGCCCGAGCCCCTAAGACA
GGCCCAGCTCAGCGGCCCAGCCCCAGAGTCCCGTCAGCTCGCCTGGGCTCCACATGCCCC
AGGGCTTCTCTGCTCATTGTTGAACTATTTATACAGCAGGTTTCGGATCAGGTTTCTCTA
CTAATAAGAATGCTAACGTGGTTGTGTAGATAATCAGCGAGGCCTTTATGCAGTTGACAC
CTTTCGCGTTATTAAAGGAAATAACAGTTCATGCGA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               79-576, gnl|bosTau2|chr15 (10207375-10207882)
               

               
               79-576, gnl|Hg17|chr11 (112640548-112641128)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               79-576, gnl|bosTau2|chr15 (10207375-10207882)
               

               
               79-576, gnl|Hg17|chr11 (112640548-112641128)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               eye (0.170503)
               

               
               fhi (0.169578)
               

               
               hyp (0.142837)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)
               

               
               fhi (0.169578)
               

               
               hyp (0.142837)

	79-576, gnl\|bosTau2\|chr15 (10207375-10207882)
	79-576, gnl\|Hg17\|chr11 (112640548-112641128)