Non-Coding RNA Search

Ss1.1-rhyp01c_j23.5

Sequence:


               
               CCAGATCCAGGCCGCATCTGTGACCTACACCACAGCTCACGGCAATACCAGGTCCTTAAC
CCACTGAGCAAGGTCAGGAATCAGACCTGTGTCCTCATGGATACTAGTCAGATTCGTTTC
CCCTGAGCCACAACGGGAACTCCAAAGGGATAAGGTTTATGGGAAGGTGTCTTCTTTTTA
GGAATATCTGACTGCTGCATTTGTTTTATTCTACCTTTTCCTTGAGCAAATTAGGCCAAG
CTCTCTGCTTTCCATGCTCTCTACAGTATATATTCTTTTACTGCATAGAATATACCTGCA
CAATATGACATCATTAATGCAGTAACAGAGCAAGCTCTTTGGCATTTTTTTGACTTTTCC
CAAAATATGGACATGACCTTTTTTTCTTAAATGACCTAAACCTCTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAGATCCAGGCCGCATCTGTGACCTACACCACAGCTCACGGCAATACCAGGTCCTTAAC
CCACTGAGCAAGGTCAGGAATCAGACCTGTGTCCTCATGGATACTAGTCAGATTCGTTTC
CCCTGAGCCACAACGGGAACTCCAAAGGGATAAGGTTTATGGGAAGGTGTCTTCTTTTTA
GGAATATCTGACTGCTGCATTTGTTTTATTCTACCTTTTCCTTGAGCAAATTAGGCCAAG
CTCTCTGCTTTCCATGCTCTCTACAGTATATATTCTTTTACTGCATAGAATATACCTGCA
CAATATGACATCATTAATGCAGTAACAGAGCAAGCTCTTTGGCATTTTTTTGACTTTTCC
CAAAATATGGACATGACCTTTTTTTCTTAAATGACCTAAACCTCTCTC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               178-408, gnl|bosTau2|chr9 (59524517-59524747)
               

               
               178-408, gnl|Hg17|chr3 (133882634-133882385)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               178-408, gnl|bosTau2|chr9 (59524517-59524747)
               

               
               178-408, gnl|Hg17|chr3 (133882634-133882385)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               duo (0.172801)
               

               
               hyp (0.142837)
               

               
               sug (0.127291)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               duo (0.172801)
               

               
               hyp (0.142837)
               

               
               sug (0.127291)

	178-408, gnl\|bosTau2\|chr9 (59524517-59524747)
	178-408, gnl\|Hg17\|chr3 (133882634-133882385)