Non-Coding RNA Search

Ss1.1-rhyp02c_m16.5

Sequence:


               
               GAGACAAGTACCTTCACACAAATTGTTTGGCAGCTTTAGCCAATATGTCGGCACAGTTTC
GTTCTCTCCATCAGTATGCTGCCCAGAGGATCATCAGCTTGTTTTCCTTGCTGTCCAAAA
AACACAACAAAGTTCTGGAACAAGCCACACAGTCCTTGAGAGGTTCACTGAGTTCCAATG
ATGTTCCTTTACCAGATTATGCACAAGACCTAAATGTCATCGAAGAAGTGATTCGAATGA
TGTTAGAGATCATCAATTCCTGCCTGACAAATTCTCTTCATCACAATCCAAACTTGGTGT
ATGCACTGCTTTACAAACGCGATCTCTTTGAACAATTTCGAACTCATCCTTCATTTCAGG
ATATAATGCAAAATATTGATCTGGTGATCACCTTCTTTAGCTCACGGTTACTACAGGCTG
GAGCTGAGCTGTCAGTGGAACGGGTCCTGGAAATCATCAAGCAAGGGGTTGTCGCGCTGC
CCAAAGACAGGCTGAAGAAATTTCCAGAACTGAAATTCAAATATGTGGAAGAGGAGCAGC
CCGAGGAGTTTTTTATCCCCTACGTTTGGTCCCTGGTGTACAACACAGCAGTAGGCCTAT
ACTGGAACCCGCAGGACATCCAGCTGTTCACCATGGATTCCGACTGAGGGCGGGACGCTG
CCTCCCAGCCTGACCCCCTCCAGCCAAGCAGCTCTTCTAGTGATGTTTTTCTGGGGAACA
GAGGTAGACAGAGTCCCTGGCGTGTCTTCCATTGAGGAGGATCACACTGGCGTGTTTCCC
TTGCACACTCGGGTTTGCAGAATTGGTGCCAGTTGGCAGTAGATCACTCAGTTTAGATGA
TAGCGTGGGGGGTGGGGGCACAGAACAATAATAAATGTAAAAACCTGCCGTTTCACATGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGACAAGTACCTTCACACAAATTGTTTGGCAGCTTTAGCCAATATGTCGGCACAGTTTC
GTTCTCTCCATCAGTATGCTGCCCAGAGGATCATCAGCTTGTTTTCCTTGCTGTCCAAAA
AACACAACAAAGTTCTGGAACAAGCCACACAGTCCTTGAGAGGTTCACTGAGTTCCAATG
ATGTTCCTTTACCAGATTATGCACAAGACCTAAATGTCATCGAAGAAGTGATTCGAATGA
TGTTAGAGATCATCAATTCCTGCCTGACAAATTCTCTTCATCACAATCCAAACTTGGTGT
ATGCACTGCTTTACAAACGCGATCTCTTTGAACAATTTCGAACTCATCCTTCATTTCAGG
ATATAATGCAAAATATTGATCTGGTGATCACCTTCTTTAGCTCACGGTTACTACAGGCTG
GAGCTGAGCTGTCAGTGGAACGGGTCCTGGAAATCATCAAGCAAGGGGTTGTCGCGCTGC
CCAAAGACAGGCTGAAGAAATTTCCAGAACTGAAATTCAAATATGTGGAAGAGGAGCAGC
CCGAGGAGTTTTTTATCCCCTACGTTTGGTCCCTGGTGTACAACACAGCAGTAGGCCTAT
ACTGGAACCCGCAGGACATCCAGCTGTTCACCATGGATTCCGACTGAGGGCGGGACGCTG
CCTCCCAGCCTGACCCCCTCCAGCCAAGCAGCTCTTCTAGTGATGTTTTTCTGGGGAACA
GAGGTAGACAGAGTCCCTGGCGTGTCTTCCATTGAGGAGGATCACACTGGCGTGTTTCCC
TTGCACACTCGGGTTTGCAGAATTGGTGCCAGTTGGCAGTAGATCACTCAGTTTAGATGA
TAGCGTGGGGGGTGGGGGCACAGAACAATAATAAATGTAAAAACCTGCCGTTTCACATGC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|9368846|emb|CAB99092.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|9368846|emb|CAB99092.1|

Expressed library(ies): 7 entry(ies)

More info

Expressed library(ies): 7 entry(ies)

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               cte (0.58548)
               

               
               ssp (0.271039)
               

               
               fat (0.147427)
               

               
               hyp (0.142837)
               

               
               csk (0.140746)
               

               
               ova (0.129132)
               

               
               tra (0.123092)

Expressed library(ies): 7 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.58548)
               

               
               ssp (0.271039)
               

               
               fat (0.147427)
               

               
               hyp (0.142837)
               

               
               csk (0.140746)
               

               
               ova (0.129132)
               

               
               tra (0.123092)

	cte (0.58548)
	ssp (0.271039)
	fat (0.147427)
	hyp (0.142837)
	csk (0.140746)
	ova (0.129132)
	tra (0.123092)