Non-Coding RNA Search

Ss1.1-rhyp03c_i18.5

Sequence:


               
               AAGATTATTCTGGAGCATTTATTGCCTTACCAGAAATGTTAGTAAGAAATGTTCTTTAGA
GTAGAAAGATAGACTTGAGTTTCTATACTTTAATAAGAGCTCTTTGTTCCTGGGGGGAGG
GGGGAGGGGAGGGGTGAGTTTTACTTTCATCTCAATTTATTAAAAACCCACAACTGAAAT
ACGTTTTATTTCAAGGATCAGCAGTTTTAGAATTTCAGATAGTACTTGCTCAGGAGTACA
TGCTACTCAAGATATTAAGAGAATAACAAGATATGTAGATCTACTGTTGAATCAGAATCT
ATGTACTTGAACAAATGTGTGAATCTTAAATATCTCAAAGAAAAAGAAAAGTGTTCTAGA
ATGTTGTTGCTTTTTTAAAAAGCACTAAAGTTAGACCAAGGTATACAGTTTTGTTCTAAC
AGACATTTAGGGTAATTGTAAAGATAAGGAATGCATTATGGGTCAAAATCAAACATTCCT
CTCATGTTATGTATATTTTGTTCCTGTTATATTGGCTTTATTTTCAAAATTGTAGTTTGT
AGTATTAGTTTCCTTTTATTGGTATTCTTGCATATACTATTCATTCAATAAATGAGTTAT
GACTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGATTATTCTGGAGCATTTATTGCCTTACCAGAAATGTTAGTAAGAAATGTTCTTTAGA
GTAGAAAGATAGACTTGAGTTTCTATACTTTAATAAGAGCTCTTTGTTCCTGGGGGGAGG
GGGGAGGGGAGGGGTGAGTTTTACTTTCATCTCAATTTATTAAAAACCCACAACTGAAAT
ACGTTTTATTTCAAGGATCAGCAGTTTTAGAATTTCAGATAGTACTTGCTCAGGAGTACA
TGCTACTCAAGATATTAAGAGAATAACAAGATATGTAGATCTACTGTTGAATCAGAATCT
ATGTACTTGAACAAATGTGTGAATCTTAAATATCTCAAAGAAAAAGAAAAGTGTTCTAGA
ATGTTGTTGCTTTTTTAAAAAGCACTAAAGTTAGACCAAGGTATACAGTTTTGTTCTAAC
AGACATTTAGGGTAATTGTAAAGATAAGGAATGCATTATGGGTCAAAATCAAACATTCCT
CTCATGTTATGTATATTTTGTTCCTGTTATATTGGCTTTATTTTCAAAATTGTAGTTTGT
AGTATTAGTTTCCTTTTATTGGTATTCTTGCATATACTATTCATTCAATAAATGAGTTAT
GACTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-614, gnl|bosTau2|chr26 (21264025-21263413)
               

               
               3-614, gnl|Hg17|chrX (133287732-133288340)
               

               
               3-614, gnl|Mm7|chrX (48048615-48049195)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-614, gnl|bosTau2|chr26 (21264025-21263413)
               

               
               3-614, gnl|Hg17|chrX (133287732-133288340)
               

               
               3-614, gnl|Mm7|chrX (48048615-48049195)

Expressed library(ies): 9 entry(ies)

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Expressed library(ies): 9 entry(ies)

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               vin (0.332557)
               

               
               eru (0.240096)
               

               
               nms (0.213858)
               

               
               fcc (0.197785)
               

               
               cmu (0.186393)
               

               
               fhi (0.169578)
               

               
               hyp (0.142837)
               

               
               ese (0.126502)
               

               
               ebs (0.118301)

Expressed library(ies): 9 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               vin (0.332557)
               

               
               eru (0.240096)
               

               
               nms (0.213858)
               

               
               fcc (0.197785)
               

               
               cmu (0.186393)
               

               
               fhi (0.169578)
               

               
               hyp (0.142837)
               

               
               ese (0.126502)
               

               
               ebs (0.118301)

	3-614, gnl\|bosTau2\|chr26 (21264025-21263413)
	3-614, gnl\|Hg17\|chrX (133287732-133288340)
	3-614, gnl\|Mm7\|chrX (48048615-48049195)

	vin (0.332557)
	eru (0.240096)
	nms (0.213858)
	fcc (0.197785)
	cmu (0.186393)
	fhi (0.169578)
	hyp (0.142837)
	ese (0.126502)
	ebs (0.118301)