Non-Coding RNA Search

Ss1.1-rhyp04c_e6.5

Sequence:


               
               AAGTTATATCGTGCCTTTCAACTTGAGAAAGTAGTAATGATTAGTGGGCCTGTTGGTGGA
AGAGGAAAGGGAAAAATGTACAAATCTGCTGTAACATTATGTCTCATTTACAGTGGAGAT
GGCCATTTAAGTCCTTGCCAAAACTGGGGTTTAATGAATATTTTTTTGAGCCTAAATATA
AATTTCCGTTTGTATTTTGTGAAAAGGTGTTCAGTAAGAGAATCTTATTTGCAATATTAT
GTAAATACAATATGATCTATTAAAAACATGCTTATCCTCCTTTCCCAGCCAAAATATCGA
TGTCCATTTTAAAACAAAATGGAAACTATCCAATACAATATTCTCCTTTGGGAGGCTCTG
TACAAGTGAAAGCAGATTTTGTGTCATTTTCTTTGGCTTTTGCTTGTCTCTTATATTTCT
TTGTGTACCTTCAAACAAATACTGGTACTCTAGATTTGTTACCTTGTATTTGCAAATATG
CCAGTGAGAGAACTAAAATGGTCATAGTGTTTATTAGAAAGAGAAAGTGTACTTAAGATT
ATTTTATTTATTAAGATCTCAAAGGCTTCTATATAAATGCACTGAAATAAATACTAGTAA
TTTCTTGTACTCATTTTTTTTTTTTTTGCTTCTCATGGAAATGTTTGTACTTTTTTATCA
TTGTCTTTTATGAAATATAATGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTTATATCGTGCCTTTCAACTTGAGAAAGTAGTAATGATTAGTGGGCCTGTTGGTGGA
AGAGGAAAGGGAAAAATGTACAAATCTGCTGTAACATTATGTCTCATTTACAGTGGAGAT
GGCCATTTAAGTCCTTGCCAAAACTGGGGTTTAATGAATATTTTTTTGAGCCTAAATATA
AATTTCCGTTTGTATTTTGTGAAAAGGTGTTCAGTAAGAGAATCTTATTTGCAATATTAT
GTAAATACAATATGATCTATTAAAAACATGCTTATCCTCCTTTCCCAGCCAAAATATCGA
TGTCCATTTTAAAACAAAATGGAAACTATCCAATACAATATTCTCCTTTGGGAGGCTCTG
TACAAGTGAAAGCAGATTTTGTGTCATTTTCTTTGGCTTTTGCTTGTCTCTTATATTTCT
TTGTGTACCTTCAAACAAATACTGGTACTCTAGATTTGTTACCTTGTATTTGCAAATATG
CCAGTGAGAGAACTAAAATGGTCATAGTGTTTATTAGAAAGAGAAAGTGTACTTAAGATT
ATTTTATTTATTAAGATCTCAAAGGCTTCTATATAAATGCACTGAAATAAATACTAGTAA
TTTCTTGTACTCATTTTTTTTTTTTTTGCTTCTCATGGAAATGTTTGTACTTTTTTATCA
TTGTCTTTTATGAAATATAATGTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-684, gnl|bosTau2|chr6 (4126889-4127586)
               

               
               1-684, gnl|Hg17|chr18 (27456875-27456214)
               

               
               1-684, gnl|Mm7|chr18 (21056462-21055327)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-684, gnl|bosTau2|chr6 (4126889-4127586)
               

               
               1-684, gnl|Hg17|chr18 (27456875-27456214)
               

               
               1-684, gnl|Mm7|chr18 (21056462-21055327)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               fco (0.471624)
               

               
               hyp (0.285673)
               

               
               fcc (0.197785)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.471624)
               

               
               hyp (0.285673)
               

               
               fcc (0.197785)

	1-684, gnl\|bosTau2\|chr6 (4126889-4127586)
	1-684, gnl\|Hg17\|chr18 (27456875-27456214)
	1-684, gnl\|Mm7\|chr18 (21056462-21055327)