Non-Coding RNA Search

Ss1.1-rhyp04c_n18.5

Sequence:


               
               GGCGTGGGCCCGGAGTCAGGCTGAACAGGGAACTCAGAGCAGTGGGGGGGTGTAGAAGTC
CCGCGGTCCCCGCTCCCTGTGGTCTGGGGAGGCCCCAGTGTCCTTTCCGTGCAGTTCATT
ATTTGTTGTGTGGCAGGCTGGCTGGGAGCATCTGCCTGTCTGTGTGCTGTTGGTGTGCCT
ATGCCTGGGGGAGGTCAGCAGGGGCCCCCTCCCCACGTGGCCCTCGCTCTGTCTATGCAG
GAGCCCCAAAGCCCGCACTTTGTCCGTGTGTTCTAGCCCTGTGGTTTTGTGTCTCTGTGT
GCGTGTGTTTCTTGGTGCTGTGGCCTATGCTATGGTCTCTGTGCCTGTGTGGCTGTGCTA
TGGTCTCTATGAGTCTGCACCATCCACGTATCCATCTGGGGTCTGTCTGTCCATCCCTCT
GTTGGTGCTGTGCCCTCGGCTATTCCAGGGAGAGGGAGGACTCTGCCGCAGCTCCGCCAA
TAAACCTGCGTCATACTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAGGGGGGGGGGCCCTTTAAAAAATTCCCCGGGGGGGGCCCAAATTTCCCCCCCCCGGT
TTTTTTTAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGTGGGCCCGGAGTCAGGCTGAACAGGGAACTCAGAGCAGTGGGGGGGTGTAGAAGTC
CCGCGGTCCCCGCTCCCTGTGGTCTGGGGAGGCCCCAGTGTCCTTTCCGTGCAGTTCATT
ATTTGTTGTGTGGCAGGCTGGCTGGGAGCATCTGCCTGTCTGTGTGCTGTTGGTGTGCCT
ATGCCTGGGGGAGGTCAGCAGGGGCCCCCTCCCCACGTGGCCCTCGCTCTGTCTATGCAG
GAGCCCCAAAGCCCGCACTTTGTCCGTGTGTTCTAGCCCTGTGGTTTTGTGTCTCTGTGT
GCGTGTGTTTCTTGGTGCTGTGGCCTATGCTATGGTCTCTGTGCCTGTGTGGCTGTGCTA
TGGTCTCTATGAGTCTGCACCATCCACGTATCCATCTGGGGTCTGTCTGTCCATCCCTCT
GTTGGTGCTGTGCCCTCGGCTATTCCAGGGAGAGGGAGGACTCTGCCGCAGCTCCGCCAA
TAAACCTGCGTCATACTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAGGGGGGGGGGCCCTTTAAAAAATTCCCCGGGGGGGGCCCAAATTTCCCCCCCCCGGT
TTTTTTTAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-500, gnl|bosTau2|chr11 (52070672-52071168)
               

               
               1-500, gnl|Hg17|chr2 (27389641-27389091)
               

               
               1-500, gnl|Mm7|chr5 (30119120-30118622)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-500, gnl|bosTau2|chr11 (52070672-52071168)
               

               
               1-500, gnl|Hg17|chr2 (27389641-27389091)
               

               
               1-500, gnl|Mm7|chr5 (30119120-30118622)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hyp (0.142837)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)

	1-500, gnl\|bosTau2\|chr11 (52070672-52071168)
	1-500, gnl\|Hg17\|chr2 (27389641-27389091)
	1-500, gnl\|Mm7\|chr5 (30119120-30118622)