Ss1.1-rhyp05c_k5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCCTGAAGATATTCTAATGGTCACAAAAGATGTCATTAAAGAATTTGCAGATGATGGTG TCAAGTACCTGGAACTAAGGAGCACACCCAGAGGAGAAAATGCTACAGGAATGACTAAAA AGACTTATGTGGAATCTGTACTTGAGGGTATAAAACAGTCCAAACAGGAAAATGTAGACA TTGATGTTAGGTATTTGATATCAATCGACAGAAGAGGTGGCCCTTCAGCAGCCAAGGAGA ATGTTAAACTTGCAGAAGAGTTCTTCCTTGCTACAGAGGGAATAGTTCTTGGCCTTGACC TCAGTGGAGACCCTACTGCAGGACAAGCAAAAGACTTCTTGGAACCTCTTTTAGAAGCTA AAAAATCAGGTCTGAAGTTGGCATTGCATCTTTCGGAGGTAACACATATTGTAGAATTAG GCGGGAGAGGGCAGATGACAGTGACAAATAATCATTTGTAAATGGTCAAAAATAAATGTG GCTTGGACAAATATTTTTAGAGAAGGAAAGGGGAAATATTTTTAAGTGTAAATTGTAATG ATAAAGGCATGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCCTGAAGATATTCTAATGGTCACAAAAGATGTCATTAAAGAATTTGCAGATGATGGTG TCAAGTACCTGGAACTAAGGAGCACACCCAGAGGAGAAAATGCTACAGGAATGACTAAAA AGACTTATGTGGAATCTGTACTTGAGGGTATAAAACAGTCCAAACAGGAAAATGTAGACA TTGATGTTAGGTATTTGATATCAATCGACAGAAGAGGTGGCCCTTCAGCAGCCAAGGAGA ATGTTAAACTTGCAGAAGAGTTCTTCCTTGCTACAGAGGGAATAGTTCTTGGCCTTGACC TCAGTGGAGACCCTACTGCAGGACAAGCAAAAGACTTCTTGGAACCTCTTTTAGAAGCTA AAAAATCAGGTCTGAAGTTGGCATTGCATCTTTCGGAGGTAACACATATTGTAGAATTAG GCGGGAGAGGGCAGATGACAGTGACAAATAATCATTTGTAAATGGTCAAAAATAAATGTG GCTTGGACAAATATTTTTAGAGAAGGAAAGGGGAAATATTTTTAAGTGTAAATTGTAATG ATAAAGGCATGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 189-314, gnl|bosTau2|chr21 (34212826-34212951) | |
| 189-314, gnl|canFam2|chr30 (13198572-13198730) | |
| 189-314, gnl|danRer3|chr25 (13528548-13528412) | |
| 189-314, gnl|dasNov1|scaffold_3030 (84574-84731) | |
| 189-314, gnl|echTel1|scaffold_181787 (8473-8625) | |
| 189-314, gnl|fr1|chrUn (37954751-37954608) | |
| 189-314, gnl|galGal2|chr10 (7015491-7015647) | |
| 189-314, gnl|hg17|chr15 (41425319-41425477) | |
| 189-314, gnl|Hg17|chr15 (41425342-41425467) | |
| 189-314, gnl|mm7|chr2 (120891045-120891202) | |
| 189-314, gnl|Mm7|chr2 (120891067-120891192) | |
| 189-314, gnl|monDom2|scaffold_53 (10739855-10739700) | |
| 189-314, gnl|oryCun1|scaffold_177470 (115080-115209) | |
| 189-314, gnl|panTro1|chr16 (41416277-41416435) | |
| 189-314, gnl|rheMac2|chr7 (21782165-21782323) | |
| 189-314, gnl|rn3|chr3 (107838443-107838601) | |
| 189-314, gnl|tetNig1|chr13 (10497616-10497473) | |
| 189-314, gnl|xenTro1|scaffold_676 (442559-442724) | |
| 318-550, gnl|bosTau2|chr21 (34213994-34214239) | |
| 318-550, gnl|Hg17|chr15 (41426506-41426736) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 189-314, gnl|bosTau2|chr21 (34212826-34212951) | |
| 189-314, gnl|canFam2|chr30 (13198572-13198730) | |
| 189-314, gnl|danRer3|chr25 (13528548-13528412) | |
| 189-314, gnl|dasNov1|scaffold_3030 (84574-84731) | |
| 189-314, gnl|echTel1|scaffold_181787 (8473-8625) | |
| 189-314, gnl|fr1|chrUn (37954751-37954608) | |
| 189-314, gnl|galGal2|chr10 (7015491-7015647) | |
| 189-314, gnl|hg17|chr15 (41425319-41425477) | |
| 189-314, gnl|Hg17|chr15 (41425342-41425467) | |
| 189-314, gnl|mm7|chr2 (120891045-120891202) | |
| 189-314, gnl|Mm7|chr2 (120891067-120891192) | |
| 189-314, gnl|monDom2|scaffold_53 (10739855-10739700) | |
| 189-314, gnl|oryCun1|scaffold_177470 (115080-115209) | |
| 189-314, gnl|panTro1|chr16 (41416277-41416435) | |
| 189-314, gnl|rheMac2|chr7 (21782165-21782323) | |
| 189-314, gnl|rn3|chr3 (107838443-107838601) | |
| 189-314, gnl|tetNig1|chr13 (10497616-10497473) | |
| 189-314, gnl|xenTro1|scaffold_676 (442559-442724) | |
| 318-550, gnl|bosTau2|chr21 (34213994-34214239) | |
| 318-550, gnl|Hg17|chr15 (41426506-41426736) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.142837) |