Ss1.1-rhyp07c_l5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTGTATCTGATCCAGGCTTGGGGGGGATTGTTGTTTACACACCAGTTATTAATGGTATT GGTGGTAATTTGGTGGCCATTCAGGCTAGCAGGATTTCTACCTACCTGCATTTACACAGC ATTCCAGGAGAACTGCCTGATGAACCCAAAGGTTGTTACTATCCATTGAGAACTTTTTTT GGTCCAGGAGTAAATAATAAGTCTGCTCAAGTTCTACTGCTCTTAGTGATACCCGGACAT TTAATTTTCCTCTACACTATTCATCTGATGAAAAGTGGTCACACTTCTTTAACTGTAATC TTCGTAGTAGTATACTTATTTGCTGCTGTGTTACAGGTGTTTACCTTGCTGTGGATCGCT GACTGGATGGTCCATCATTTCTGGAGGAAAGGAAAGGACCCGGATAGCTTCTCCATCCCC TACCTGACGGCATTGGGTGATCTGCTCGGGACTGCCTTGTTAGCCTTAAGTTTTCATTTT CTTTGGCTTATTGGAGATCGAGATGGAGATGTTGGAGACTAATGAATCCTCGCAAGTTAC TGAGAAGGAACACACAAGACAACCACTTATGACTCTTTTTCAGAAAGTTTAATCCAGTAG TTTGACTTCTGCCAGGGTGATCTTCCGTTGGCCCTGATTCCATTAAATGGCCTTAACATT TTTTTAAAGGAATTTGTGTTAAACCAGAATGAACAGTATTTGTGCTGCTTTTCATAGAAT AAATGATGATTTGACACAGATATAGACACAAGCAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTGTATCTGATCCAGGCTTGGGGGGGATTGTTGTTTACACACCAGTTATTAATGGTATT GGTGGTAATTTGGTGGCCATTCAGGCTAGCAGGATTTCTACCTACCTGCATTTACACAGC ATTCCAGGAGAACTGCCTGATGAACCCAAAGGTTGTTACTATCCATTGAGAACTTTTTTT GGTCCAGGAGTAAATAATAAGTCTGCTCAAGTTCTACTGCTCTTAGTGATACCCGGACAT TTAATTTTCCTCTACACTATTCATCTGATGAAAAGTGGTCACACTTCTTTAACTGTAATC TTCGTAGTAGTATACTTATTTGCTGCTGTGTTACAGGTGTTTACCTTGCTGTGGATCGCT GACTGGATGGTCCATCATTTCTGGAGGAAAGGAAAGGACCCGGATAGCTTCTCCATCCCC TACCTGACGGCATTGGGTGATCTGCTCGGGACTGCCTTGTTAGCCTTAAGTTTTCATTTT CTTTGGCTTATTGGAGATCGAGATGGAGATGTTGGAGACTAATGAATCCTCGCAAGTTAC TGAGAAGGAACACACAAGACAACCACTTATGACTCTTTTTCAGAAAGTTTAATCCAGTAG TTTGACTTCTGCCAGGGTGATCTTCCGTTGGCCCTGATTCCATTAAATGGCCTTAACATT TTTTTAAAGGAATTTGTGTTAAACCAGAATGAACAGTATTTGTGCTGCTTTTCATAGAAT AAATGATGATTTGACACAGATATAGACACAAGCAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 55-188, gnl|bosTau2|chr2 (19194804-19194937) | |
| 55-188, gnl|canFam2|chr10 (36607986-36607806) | |
| 55-188, gnl|canFam2|chr7 (80143543-80143686) | |
| 55-188, gnl|danRer3|chrUn (17881494-17881639) | |
| 55-188, gnl|dasNov1|scaffold_65088 (6872-6767) | |
| 55-188, gnl|dasNov1|scaffold_65088 (6719-6896) | |
| 55-188, gnl|echTel1|scaffold_199789 (7367-7489) | |
| 55-188, gnl|echTel1|scaffold_199789 (7523-7344) | |
| 55-188, gnl|fr1|chrUn (245650337-245650457) | |
| 55-188, gnl|fr1|chrUn (245650475-245650320) | |
| 55-188, gnl|galGal2|chr1 (51073354-51073184) | |
| 55-188, gnl|hg17|chr12 (103742063-103742243) | |
| 55-188, gnl|Hg17|chr12 (103742220-103742087) | |
| 55-188, gnl|hg17|chr18 (11318046-11318184) | |
| 55-188, gnl|loxAfr1|scaffold_31710 (29485-29615) | |
| 55-188, gnl|loxAfr1|scaffold_31710 (29641-29461) | |
| 55-188, gnl|mm7|chr10 (82797489-82797675) | |
| 55-188, gnl|Mm7|chr10 (82797652-82797519) | |
| 55-188, gnl|mm7|chr18 (63912426-63912565) | |
| 55-188, gnl|monDom2|scaffold_34 (8379057-8378878) | |
| 55-188, gnl|oryCun1|scaffold_132720 (25999-25867) | |
| 55-188, gnl|oryCun1|scaffold_178617 (192986-193121) | |
| 55-188, gnl|panTro1|chr10 (106226468-106226648) | |
| 55-188, gnl|panTro1|chr17_random (1948119-1948257) | |
| 55-188, gnl|rheMac2|chr11 (105962844-105963024) | |
| 55-188, gnl|rheMac2|chr18 (3281867-3282005) | |
| 55-188, gnl|rn3|chr18 (59752958-59753097) | |
| 55-188, gnl|rn3|chr7 (22662526-22662344) | |
| 55-188, gnl|tetNig1|chr11 (10320735-10320822) | |
| 55-188, gnl|tetNig1|chrUn_random (48692302-48692155) | |
| 55-188, gnl|xenTro1|scaffold_434 (678935-679123) | |
| 319-753, gnl|bosTau2|chr2 (19221225-19221675) | |
| 319-753, gnl|Hg17|chr12 (103701600-103701156) | |
| 319-753, gnl|Mm7|chr10 (82775277-82774839) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 55-188, gnl|bosTau2|chr2 (19194804-19194937) | |
| 55-188, gnl|canFam2|chr10 (36607986-36607806) | |
| 55-188, gnl|canFam2|chr7 (80143543-80143686) | |
| 55-188, gnl|danRer3|chrUn (17881494-17881639) | |
| 55-188, gnl|dasNov1|scaffold_65088 (6872-6767) | |
| 55-188, gnl|dasNov1|scaffold_65088 (6719-6896) | |
| 55-188, gnl|echTel1|scaffold_199789 (7367-7489) | |
| 55-188, gnl|echTel1|scaffold_199789 (7523-7344) | |
| 55-188, gnl|fr1|chrUn (245650337-245650457) | |
| 55-188, gnl|fr1|chrUn (245650475-245650320) | |
| 55-188, gnl|galGal2|chr1 (51073354-51073184) | |
| 55-188, gnl|hg17|chr12 (103742063-103742243) | |
| 55-188, gnl|Hg17|chr12 (103742220-103742087) | |
| 55-188, gnl|hg17|chr18 (11318046-11318184) | |
| 55-188, gnl|loxAfr1|scaffold_31710 (29485-29615) | |
| 55-188, gnl|loxAfr1|scaffold_31710 (29641-29461) | |
| 55-188, gnl|mm7|chr10 (82797489-82797675) | |
| 55-188, gnl|Mm7|chr10 (82797652-82797519) | |
| 55-188, gnl|mm7|chr18 (63912426-63912565) | |
| 55-188, gnl|monDom2|scaffold_34 (8379057-8378878) | |
| 55-188, gnl|oryCun1|scaffold_132720 (25999-25867) | |
| 55-188, gnl|oryCun1|scaffold_178617 (192986-193121) | |
| 55-188, gnl|panTro1|chr10 (106226468-106226648) | |
| 55-188, gnl|panTro1|chr17_random (1948119-1948257) | |
| 55-188, gnl|rheMac2|chr11 (105962844-105963024) | |
| 55-188, gnl|rheMac2|chr18 (3281867-3282005) | |
| 55-188, gnl|rn3|chr18 (59752958-59753097) | |
| 55-188, gnl|rn3|chr7 (22662526-22662344) | |
| 55-188, gnl|tetNig1|chr11 (10320735-10320822) | |
| 55-188, gnl|tetNig1|chrUn_random (48692302-48692155) | |
| 55-188, gnl|xenTro1|scaffold_434 (678935-679123) | |
| 319-753, gnl|bosTau2|chr2 (19221225-19221675) | |
| 319-753, gnl|Hg17|chr12 (103701600-103701156) | |
| 319-753, gnl|Mm7|chr10 (82775277-82774839) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.142837) |