Ss1.1-rhyp08c_e13.5.5
|
CCGAGGGCCTGGATGTGATGGCGTCACAGAAGAGACCCTCCCAGAGGCACGGATCAAAGT
ACCTGGCCTCCGCGAGCACCATGGACCACGCCAGGCACGGCTTCCTCCCCAGGCACAGAG
ACACTGGCATCCTCGACTCCCTCGGCCGCTTCTTTGGCGCTGACAGGGGTGCGCCCAAGC
GGGGCTCGGGCAAGGATGGACACCACGCGGCCAGGACCACCCACTACGGCTCCCTGCCCC
AGAAGGCACAGCACGGCCGGCCCCAGGATGAAAACCCTGTAGTGCATTTCTTCAAGAACA
TCGTGACGCCTCGCACACCTCCCCCATCTCAAGGGAAGGGGCGAGGACTGTCCCTCAGCA
GATTTAGCTGGGGCGCCGAGGGCCAGAAGCCGGGATTCGGCTACGGAGGCAGAGCTCCTG
ACTACAAACCGGCTCACAAGGGACTCAAGGGGGCCCAGGACGCCCAGGGCACACTTTCCA
AAATCTTCAAGCTGGGAGGACGGGACAGCCGCTCCGGGTCCCCCATGGCCAGACGTTGAC
GCTCCTTCCTCTCAGGATCCTTCCCGGCTTCTAACACGTTAACCGCGTAGATTCCCTAGT
ATAGCACGTGCCCCTAACGCCTGGTGACGACGCCCAGCGGGCTCCACTCGGAGGAAACGC
TCCACCGTCGCCCTACCTCGGAGACAGTGACATCCCCTCCCCGCTCGCCCTCATCCTGAG
ATGGCTTCGGTGGGGACACTGCTGTGGGAACATTGCCGGGGGACACTGCTGTGGGTTGGC
CCGTGCAGGGCATAGAGATGGTGTGGCTCCAAGCTTCCTTTGGTTTCTTTCGTGCCTCCT
CCCTCTCACCCGCTAAAGTATTTAATCTTCCTAACAGGGTCGGGCCGTCGGAGAGGCTTG
GCGGCGGGAGCTTTGGTATGTGACATGTGGGCGGGCAGCGGGAGAGGCCGCGGTGGCCGT
GGCTCACCACCCCCAGCTCAGCCGAGAGGGGATGCGGGGGCAGACTCGGGCCCAGTGGGG
CTGCGGACAGGAAACAGGGTCTTCTTGGAAATCGGGCTGGCAGAGCGGGCCCCAGGGCAG
CCTCCTCGACGCCCTGTGTCCTGAGGGCCCGGCCGGGAGTGTGGGGAGATGGCTCAACTC
AGAACGGATGGCAGGGGTTTGGCTCAGCCTCGCGGTGGCATGGTGGTCACCGCGAGCGCA
AAGGTAACAGGTGGCGTGCTCAGCGGCGGTGCTCACGGCAAATACTAACCTTCGGTGGAA
AGATAACTGTCCTTTCCGCTTGCCTCCTAGAAATCCCCTGACCAATACACTCACCTTACT
GGGCCGCTGCCGGCTCGGTGGGCGGCCCGGCCACGTGAGGACAGGAGAGTCCCTCTGAAA
TCACACTCTTTCCTAGCGTGGGCTGACACTTTGCAGCTCCCCCTCCTTAACCTACTGATC
CCCGCCTTTTGATTTTAGCGTCTCTTTCTTTTCTAAACCTCCAAAGAGCCCTACACTGGC
GTCACCCGCCCCCAGAACAAAGATGAGAAATAGCCAACATAATACCCGAGCGTATCTCTT
TAATCCCGGTCTAATTCTGAAGGTTTCACGTGGGTTTAATATAATGTCTATTAATGTAGA
GCCTCAATGATGAGAGGGTAAGAAATAAGAGAAATACATTTTCAGAAACAAACCCTCTGA
ATTGCTTGACACACACTTTGCATCGTGGAGCAGATCGCTGATGGAGTGATCTCTCACGGC
TGCCCCCAAACAGCCAGAGCTGTGCGGATGGGCCTGGCGGAAATACGCCCTGTTCTTGAA
GTTGAAATAAAATAAACACTGTTAATGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCGAGGGCCTGGATGTGATGGCGTCACAGAAGAGACCCTCCCAGAGGCACGGATCAAAGT
ACCTGGCCTCCGCGAGCACCATGGACCACGCCAGGCACGGCTTCCTCCCCAGGCACAGAG
ACACTGGCATCCTCGACTCCCTCGGCCGCTTCTTTGGCGCTGACAGGGGTGCGCCCAAGC
GGGGCTCGGGCAAGGATGGACACCACGCGGCCAGGACCACCCACTACGGCTCCCTGCCCC
AGAAGGCACAGCACGGCCGGCCCCAGGATGAAAACCCTGTAGTGCATTTCTTCAAGAACA
TCGTGACGCCTCGCACACCTCCCCCATCTCAAGGGAAGGGGCGAGGACTGTCCCTCAGCA
GATTTAGCTGGGGCGCCGAGGGCCAGAAGCCGGGATTCGGCTACGGAGGCAGAGCTCCTG
ACTACAAACCGGCTCACAAGGGACTCAAGGGGGCCCAGGACGCCCAGGGCACACTTTCCA
AAATCTTCAAGCTGGGAGGACGGGACAGCCGCTCCGGGTCCCCCATGGCCAGACGTTGAC
GCTCCTTCCTCTCAGGATCCTTCCCGGCTTCTAACACGTTAACCGCGTAGATTCCCTAGT
ATAGCACGTGCCCCTAACGCCTGGTGACGACGCCCAGCGGGCTCCACTCGGAGGAAACGC
TCCACCGTCGCCCTACCTCGGAGACAGTGACATCCCCTCCCCGCTCGCCCTCATCCTGAG
ATGGCTTCGGTGGGGACACTGCTGTGGGAACATTGCCGGGGGACACTGCTGTGGGTTGGC
CCGTGCAGGGCATAGAGATGGTGTGGCTCCAAGCTTCCTTTGGTTTCTTTCGTGCCTCCT
CCCTCTCACCCGCTAAAGTATTTAATCTTCCTAACAGGGTCGGGCCGTCGGAGAGGCTTG
GCGGCGGGAGCTTTGGTATGTGACATGTGGGCGGGCAGCGGGAGAGGCCGCGGTGGCCGT
GGCTCACCACCCCCAGCTCAGCCGAGAGGGGATGCGGGGGCAGACTCGGGCCCAGTGGGG
CTGCGGACAGGAAACAGGGTCTTCTTGGAAATCGGGCTGGCAGAGCGGGCCCCAGGGCAG
CCTCCTCGACGCCCTGTGTCCTGAGGGCCCGGCCGGGAGTGTGGGGAGATGGCTCAACTC
AGAACGGATGGCAGGGGTTTGGCTCAGCCTCGCGGTGGCATGGTGGTCACCGCGAGCGCA
AAGGTAACAGGTGGCGTGCTCAGCGGCGGTGCTCACGGCAAATACTAACCTTCGGTGGAA
AGATAACTGTCCTTTCCGCTTGCCTCCTAGAAATCCCCTGACCAATACACTCACCTTACT
GGGCCGCTGCCGGCTCGGTGGGCGGCCCGGCCACGTGAGGACAGGAGAGTCCCTCTGAAA
TCACACTCTTTCCTAGCGTGGGCTGACACTTTGCAGCTCCCCCTCCTTAACCTACTGATC
CCCGCCTTTTGATTTTAGCGTCTCTTTCTTTTCTAAACCTCCAAAGAGCCCTACACTGGC
GTCACCCGCCCCCAGAACAAAGATGAGAAATAGCCAACATAATACCCGAGCGTATCTCTT
TAATCCCGGTCTAATTCTGAAGGTTTCACGTGGGTTTAATATAATGTCTATTAATGTAGA
GCCTCAATGATGAGAGGGTAAGAAATAAGAGAAATACATTTTCAGAAACAAACCCTCTGA
ATTGCTTGACACACACTTTGCATCGTGGAGCAGATCGCTGATGGAGTGATCTCTCACGGC
TGCCCCCAAACAGCCAGAGCTGTGCGGATGGGCCTGGCGGAAATACGCCCTGTTCTTGAA
GTTGAAATAAAATAAACACTGTTAATGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
|
gi|48374091|ref|NP_001001546.1| |
Protein identifier
|
gi|48374091|ref|NP_001001546.1| |
|
1-195, gnl|bosTau2|chr24 (1538347-1538535) |
|
1-195, gnl|Hg17|chr18 (72857969-72857775) |
|
1-195, gnl|Mm7|chr18 (82903926-82904114) |
| |
|
353-495, gnl|bosTau2|chr24 (2808929-2808791) |
|
353-495, gnl|canFam2|chr1 (5948009-5947867) |
|
353-495, gnl|dasNov1|scaffold_223251 (3696-3539) |
|
353-495, gnl|echTel1|scaffold_270514 (2516-2663) |
|
353-495, gnl|galGal2|chr2 (90459505-90459354) |
|
353-495, gnl|hg17|chr18 (72825695-72825852) |
|
353-495, gnl|Hg17|chr18 (72825856-72825718) |
|
353-495, gnl|mm7|chr18 (82928430-82928287) |
|
353-495, gnl|Mm7|chr18 (82928280-82928422) |
|
353-495, gnl|monDom2|scaffold_3 (122937648-122937502) |
|
353-495, gnl|panTro1|chr17 (69989342-69989499) |
|
353-495, gnl|rheMac2|chr18 (70436593-70436750) |
|
353-495, gnl|rn3|chr18 (79123785-79123642) |
| |
|
756-1830, gnl|bosTau2|chr24 (2803949-2802895) |
|
756-1830, gnl|Hg17|chr18 (72821013-72819777) |
|
756-1830, gnl|Mm7|chr18 (82933859-82934997) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-195, gnl|bosTau2|chr24 (1538347-1538535) |
|
1-195, gnl|Hg17|chr18 (72857969-72857775) |
|
1-195, gnl|Mm7|chr18 (82903926-82904114) |
| |
|
353-495, gnl|bosTau2|chr24 (2808929-2808791) |
|
353-495, gnl|canFam2|chr1 (5948009-5947867) |
|
353-495, gnl|dasNov1|scaffold_223251 (3696-3539) |
|
353-495, gnl|echTel1|scaffold_270514 (2516-2663) |
|
353-495, gnl|galGal2|chr2 (90459505-90459354) |
|
353-495, gnl|hg17|chr18 (72825695-72825852) |
|
353-495, gnl|Hg17|chr18 (72825856-72825718) |
|
353-495, gnl|mm7|chr18 (82928430-82928287) |
|
353-495, gnl|Mm7|chr18 (82928280-82928422) |
|
353-495, gnl|monDom2|scaffold_3 (122937648-122937502) |
|
353-495, gnl|panTro1|chr17 (69989342-69989499) |
|
353-495, gnl|rheMac2|chr18 (70436593-70436750) |
|
353-495, gnl|rn3|chr18 (79123785-79123642) |
| |
|
756-1830, gnl|bosTau2|chr24 (2803949-2802895) |
|
756-1830, gnl|Hg17|chr18 (72821013-72819777) |
|
756-1830, gnl|Mm7|chr18 (82933859-82934997) |
|
fbs (39.1022) |
|
hyp (22.2825) |
|
spc (17.4583) |
|
fhi (14.4141) |
|
cbe (9.56938) |
|
fce (4.61706) |
|
cbr (3.07141) |
|
fcc (1.97785) |
|
fco (1.57208) |
|
nlu (0.191681) |
|
nep (0.183925) |
|
pgl (0.118483) |
|
fbs (39.1022) |
|
hyp (22.2825) |
|
spc (17.4583) |
|
fhi (14.4141) |
|
cbe (9.56938) |
|
fce (4.61706) |
|
cbr (3.07141) |
|
fcc (1.97785) |
|
fco (1.57208) |
|
nlu (0.191681) |
|
nep (0.183925) |
|
pgl (0.118483) |
