Ss1.1-rhyp13c_c3.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTTTTTTTTTTTCTCAGTCTTTTCAGCAACCTCTACCTTGGGATCAGTGTCCTTTGGT GAAAATGCTTCACATACTTTTGTAGAGCCAGAATGTGAAAAAATTCTGCCACTACCTACT ACTGGTATAGAGAAGCCCTGAATATTTCCAGTTCCATCTCCGAAAGTGGGGGCTTAAACT GGAAGATGACCATCTGCTTGCTGGCCGCCTGGGTCGTGGTGTGCTTGGCTATGATCAAAG GCATTCAGTCATCTGGAAAAATCATGTATTTTAGCTCTCTGTTCCCGTATGTCGTACTTC TGTGCTTTCTGATCAGAGCACTCCTTCTGAACGGCTCAGTTGATGGCATCCGTCACATGT TTACCCCTGAGCTTGAAATAATGCTGGAGCCCAAGGTCTGGAGAGAAGCTGCAGCTCAGG TGTTCTTTGCCTTAGGCCTGGGATTCGGTGGCGTCATTGCCTTTTCAAGCTACAACAAGA GAGACAACAACTGCCACTTTGATGCCGTCCTGGTGTCGTTCATCAACTTTTTTACTTCCA TCCTGGCAACACTGGTGGTGTTTGCAGTTCTGGGCTTCAAAGCAAACGTTATAAATGAGA AATGCATTGCAGAAAATTCGGAGGTGATCATCANACTTGTGAAAATGGGCAACATTAGTC AAGATATTATTCCCCGTCACGTTN |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTTTTTTTTTTTCTCAGTCTTTTCAGCAACCTCTACCTTGGGATCAGTGTCCTTTGGT GAAAATGCTTCACATACTTTTGTAGAGCCAGAATGTGAAAAAATTCTGCCACTACCTACT ACTGGTATAGAGAAGCCCTGAATATTTCCAGTTCCATCTCCGAAAGTGGGGGCTTAAACT GGAAGATGACCATCTGCTTGCTGGCCGCCTGGGTCGTGGTGTGCTTGGCTATGATCAAAG GCATTCAGTCATCTGGAAAAATCATGTATTTTAGCTCTCTGTTCCCGTATGTCGTACTTC TGTGCTTTCTGATCAGAGCACTCCTTCTGAACGGCTCAGTTGATGGCATCCGTCACATGT TTACCCCTGAGCTTGAAATAATGCTGGAGCCCAAGGTCTGGAGAGAAGCTGCAGCTCAGG TGTTCTTTGCCTTAGGCCTGGGATTCGGTGGCGTCATTGCCTTTTCAAGCTACAACAAGA GAGACAACAACTGCCACTTTGATGCCGTCCTGGTGTCGTTCATCAACTTTTTTACTTCCA TCCTGGCAACACTGGTGGTGTTTGCAGTTCTGGGCTTCAAAGCAAACGTTATAAATGAGA AATGCATTGCAGAAAATTCGGAGGTGATCATCANACTTGTGAAAATGGGCAACATTAGTC AAGATATTATTCCCCGTCACGTTN |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 82-259, gnl|bosTau2|chr3 (25271904-25271726) | |
| 82-259, gnl|canFam2|chr6 (44858972-44858779) | |
| 82-259, gnl|danRer3|chr8 (17482285-17482475) | |
| 82-259, gnl|dasNov1|scaffold_17133 (11190-10999) | |
| 82-259, gnl|echTel1|scaffold_277476 (19518-19325) | |
| 82-259, gnl|fr1|chrUn (231770107-231770297) | |
| 82-259, gnl|galGal2|chr1 (38449776-38449586) | |
| 82-259, gnl|hg17|chr1 (110429438-110429634) | |
| 82-259, gnl|Hg17|chr1 (110429445-110429623) | |
| 82-259, gnl|loxAfr1|scaffold_12252 (4290-4097) | |
| 82-259, gnl|mm7|chr3 (107311535-107311343) | |
| 82-259, gnl|Mm7|chr3 (107311526-107311348) | |
| 82-259, gnl|monDom2|scaffold_0 (6114277-6114083) | |
| 82-259, gnl|oryCun1|scaffold_209241 (247139-246944) | |
| 82-259, gnl|panTro1|chr1 (112013221-112013025) | |
| 82-259, gnl|rheMac2|chr1 (113239894-113240090) | |
| 82-259, gnl|rn3|chr7 (41546521-41546703) | |
| 82-259, gnl|tetNig1|chr9 (3004921-3004725) | |
| 82-259, gnl|xenTro1|scaffold_19 (2557593-2557785) | |
| 370-604, gnl|bosTau2|chr3 (25250408-25250174) | |
| 370-604, gnl|canFam2|chr6 (44843021-44842864) | |
| 370-604, gnl|danRer3|chr8 (17485540-17485696) | |
| 370-604, gnl|dasNov1|scaffold_107974 (10352-10509) | |
| 370-604, gnl|echTel1|scaffold_277476 (2304-2147) | |
| 370-604, gnl|fr1|chrUn (231771520-231771676) | |
| 370-604, gnl|galGal2|chr26 (29021-29178) | |
| 370-604, gnl|hg17|chr1 (110446633-110446790) | |
| 370-604, gnl|Hg17|chr1 (110446634-110446868) | |
| 370-604, gnl|loxAfr1|scaffold_17287 (40146-40007) | |
| 370-604, gnl|mm7|chr3 (107295711-107295554) | |
| 370-604, gnl|Mm7|chr3 (107295708-107295474) | |
| 370-604, gnl|monDom2|scaffold_0 (6110024-6109867) | |
| 370-604, gnl|oryCun1|scaffold_173491 (31177-31020) | |
| 370-604, gnl|panTro1|chr1 (111836404-111836247) | |
| 370-604, gnl|rheMac2|chr1 (113256973-113257130) | |
| 370-604, gnl|rn3|chr7 (41557460-41557617) | |
| 370-604, gnl|tetNig1|chr9 (3003529-3003373) | |
| 370-604, gnl|xenTro1|scaffold_19 (2569675-2569832) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 82-259, gnl|bosTau2|chr3 (25271904-25271726) | |
| 82-259, gnl|canFam2|chr6 (44858972-44858779) | |
| 82-259, gnl|danRer3|chr8 (17482285-17482475) | |
| 82-259, gnl|dasNov1|scaffold_17133 (11190-10999) | |
| 82-259, gnl|echTel1|scaffold_277476 (19518-19325) | |
| 82-259, gnl|fr1|chrUn (231770107-231770297) | |
| 82-259, gnl|galGal2|chr1 (38449776-38449586) | |
| 82-259, gnl|hg17|chr1 (110429438-110429634) | |
| 82-259, gnl|Hg17|chr1 (110429445-110429623) | |
| 82-259, gnl|loxAfr1|scaffold_12252 (4290-4097) | |
| 82-259, gnl|mm7|chr3 (107311535-107311343) | |
| 82-259, gnl|Mm7|chr3 (107311526-107311348) | |
| 82-259, gnl|monDom2|scaffold_0 (6114277-6114083) | |
| 82-259, gnl|oryCun1|scaffold_209241 (247139-246944) | |
| 82-259, gnl|panTro1|chr1 (112013221-112013025) | |
| 82-259, gnl|rheMac2|chr1 (113239894-113240090) | |
| 82-259, gnl|rn3|chr7 (41546521-41546703) | |
| 82-259, gnl|tetNig1|chr9 (3004921-3004725) | |
| 82-259, gnl|xenTro1|scaffold_19 (2557593-2557785) | |
| 370-604, gnl|bosTau2|chr3 (25250408-25250174) | |
| 370-604, gnl|canFam2|chr6 (44843021-44842864) | |
| 370-604, gnl|danRer3|chr8 (17485540-17485696) | |
| 370-604, gnl|dasNov1|scaffold_107974 (10352-10509) | |
| 370-604, gnl|echTel1|scaffold_277476 (2304-2147) | |
| 370-604, gnl|fr1|chrUn (231771520-231771676) | |
| 370-604, gnl|galGal2|chr26 (29021-29178) | |
| 370-604, gnl|hg17|chr1 (110446633-110446790) | |
| 370-604, gnl|Hg17|chr1 (110446634-110446868) | |
| 370-604, gnl|loxAfr1|scaffold_17287 (40146-40007) | |
| 370-604, gnl|mm7|chr3 (107295711-107295554) | |
| 370-604, gnl|Mm7|chr3 (107295708-107295474) | |
| 370-604, gnl|monDom2|scaffold_0 (6110024-6109867) | |
| 370-604, gnl|oryCun1|scaffold_173491 (31177-31020) | |
| 370-604, gnl|panTro1|chr1 (111836404-111836247) | |
| 370-604, gnl|rheMac2|chr1 (113256973-113257130) | |
| 370-604, gnl|rn3|chr7 (41557460-41557617) | |
| 370-604, gnl|tetNig1|chr9 (3003529-3003373) | |
| 370-604, gnl|xenTro1|scaffold_19 (2569675-2569832) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.142837) |