Non-Coding RNA Search

Ss1.1-rhyp13c_j6.5

Sequence:


               
               AGGAGCTAGAGGGGGTACAGCAGTCGTTACAGAATATCAAATCTGAGTTGGAGATGGCAC
GGGAAGATCTGTCCATGACCCAGAAAGACAAGTTCATGCTTCAAGCTAAAGTGTCGGAGC
TGAAGAACAACATGAAGACTCTGCTCCAGCAAAACCAGCAGCTCAAGCTGGACCTGCGGC
GGGGTGCAGCCAAAACGAGAAAGGAGCTGAAAGAAGCCAGCTCGTCCAGCCCTGTGACAC
CGGTGAAGATCCCTGACTGTCCCGTCCCAGCCTCGCTGCTGGAGGAGCTGCTGCGGCCCC
CACCCGCCGTGAGCAAGGAGCCCCTCAAGAACCTCTACAGCTGCCTCCAGCAACTCAAGC
AGGAGATGGACAGCCTGCAGCGCCAGATGGAGGCACATACCGTCACTGTGCACGAGTCGC
TGTCCTCATGGACTCAGGGGGACCCCACGAGCCCCTCCCCTCCGGGTGATCACGCCAACC
CCAGAGGAGACACGGAGAGACCTGGTCAGAGCAGGGCCTCCGGGGAAGGGCTTGGAACGG
CGGCTGAGCGTCCGCACCATGAGTGCTTGTAACCACCTGGAGGAATGTTCTCTTGTCAAT
ATTATTTATTTGACTGTGAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGAGCTAGAGGGGGTACAGCAGTCGTTACAGAATATCAAATCTGAGTTGGAGATGGCAC
GGGAAGATCTGTCCATGACCCAGAAAGACAAGTTCATGCTTCAAGCTAAAGTGTCGGAGC
TGAAGAACAACATGAAGACTCTGCTCCAGCAAAACCAGCAGCTCAAGCTGGACCTGCGGC
GGGGTGCAGCCAAAACGAGAAAGGAGCTGAAAGAAGCCAGCTCGTCCAGCCCTGTGACAC
CGGTGAAGATCCCTGACTGTCCCGTCCCAGCCTCGCTGCTGGAGGAGCTGCTGCGGCCCC
CACCCGCCGTGAGCAAGGAGCCCCTCAAGAACCTCTACAGCTGCCTCCAGCAACTCAAGC
AGGAGATGGACAGCCTGCAGCGCCAGATGGAGGCACATACCGTCACTGTGCACGAGTCGC
TGTCCTCATGGACTCAGGGGGACCCCACGAGCCCCTCCCCTCCGGGTGATCACGCCAACC
CCAGAGGAGACACGGAGAGACCTGGTCAGAGCAGGGCCTCCGGGGAAGGGCTTGGAACGG
CGGCTGAGCGTCCGCACCATGAGTGCTTGTAACCACCTGGAGGAATGTTCTCTTGTCAAT
ATTATTTATTTGACTGTGAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               31-193, gnl|bosTau2|chr17 (23166776-23166614)
               

               
               31-193, gnl|Hg17|chr12 (131962243-131962081)
               

               
               31-193, gnl|Mm7|chr5 (109387303-109387465)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               31-193, gnl|bosTau2|chr17 (23166776-23166614)
               

               
               31-193, gnl|Hg17|chr12 (131962243-131962081)
               

               
               31-193, gnl|Mm7|chr5 (109387303-109387465)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               hyp (0.142837)
               

               
               clu (0.119646)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)
               

               
               clu (0.119646)

	31-193, gnl\|bosTau2\|chr17 (23166776-23166614)
	31-193, gnl\|Hg17\|chr12 (131962243-131962081)
	31-193, gnl\|Mm7\|chr5 (109387303-109387465)