Non-Coding RNA Search

Ss1.1-rhyp13c_m8.5

Sequence:


               
               CCCAGATGTCCTATCAAATTAAAAGCATCTACGCAGCTTGACAGGATTTGTGAGAGAAAC
TATAGAACTATTTATAGTTTCAGTTATTCTGCTGGTAATGGAAACTAATAGCTTCACTGG
TTAATGTCAACACAAAGGAGAAACTGTAAATTTCAGTGACTAAAACAGAAATGGTTTTAT
TGAGACATCAGCTAGGTAAGAACAAAGCTGCAGCTGTTGCTCTCATGACCTAATATAGTA
CTGAGAAGCAAATGATTTATGATGCTAATATGATAATTATACTTCCCTACTAAGGGGCTC
CAGTTACTCTTTGATATTCTCATTTCTGGTAATCTAATGCAGCTGAAAAGTTCATTTCTC
AGCCAAAGTAAGAGTCAAAAGGTGACACTTTTGAGGGCTTTGTATCGAAATACGTGCAGA
GTCAGAGAAAAAAATTATATAAAGGCAAAAATGTTAATTTTATTTTCTTATTTAGATAAG
TCATTTTTTTGGCTGCACCTACACCATGAGGATATTCCTGGGTGAGGGACTGAACCTATG
ACACAGCAGTGACCCAAGCCACAGGAGTGACAATGCTGGATCCTTAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCAGATGTCCTATCAAATTAAAAGCATCTACGCAGCTTGACAGGATTTGTGAGAGAAAC
TATAGAACTATTTATAGTTTCAGTTATTCTGCTGGTAATGGAAACTAATAGCTTCACTGG
TTAATGTCAACACAAAGGAGAAACTGTAAATTTCAGTGACTAAAACAGAAATGGTTTTAT
TGAGACATCAGCTAGGTAAGAACAAAGCTGCAGCTGTTGCTCTCATGACCTAATATAGTA
CTGAGAAGCAAATGATTTATGATGCTAATATGATAATTATACTTCCCTACTAAGGGGCTC
CAGTTACTCTTTGATATTCTCATTTCTGGTAATCTAATGCAGCTGAAAAGTTCATTTCTC
AGCCAAAGTAAGAGTCAAAAGGTGACACTTTTGAGGGCTTTGTATCGAAATACGTGCAGA
GTCAGAGAAAAAAATTATATAAAGGCAAAAATGTTAATTTTATTTTCTTATTTAGATAAG
TCATTTTTTTGGCTGCACCTACACCATGAGGATATTCCTGGGTGAGGGACTGAACCTATG
ACACAGCAGTGACCCAAGCCACAGGAGTGACAATGCTGGATCCTTAAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-487, gnl|bosTau2|chr14 (33523848-33523359)
               

               
               1-487, gnl|Hg17|chr12 (43978842-43978359)
               

               
               1-487, gnl|Mm7|chr15 (95862016-95861550)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-487, gnl|bosTau2|chr14 (33523848-33523359)
               

               
               1-487, gnl|Hg17|chr12 (43978842-43978359)
               

               
               1-487, gnl|Mm7|chr15 (95862016-95861550)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hyp (0.285673)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.285673)

	1-487, gnl\|bosTau2\|chr14 (33523848-33523359)
	1-487, gnl\|Hg17\|chr12 (43978842-43978359)
	1-487, gnl\|Mm7\|chr15 (95862016-95861550)