Non-Coding RNA Search

Ss1.1-rhyp15c_e21.5

Sequence:


               
               CTGATACAAGGTTAGTACAGGTGGAGCTTGTAGAACAGTTCCTGGCACAGAGTCGGTCTC
AATAAATGTTGGCTGCTACCATCCTTAGGGGGGAACCAGAAGCAACTGGAGTGGTGGTGT
GGAGATCCTGGGGCTTCATCAGGCTGTTTTCCCTTCTAGTTGCATTGGACATGGGATTTG
CTCTCTACAGAAGGTTCTTTGTCCCTGCAAACGGGTCCCCGGTGTCTTTTGCAGCTCACA
TTGCAGGTGGATTTGCTGGAATGTCCATAGGCTACACCGTGTTCAGCTGCTTTGATAAGG
CACTCCTGAAAGATCCAAGGTTTTGGGTAGCAATTGCAGCTTATTTAGCTTGCGTCTTAT
TTGCTGTGTTTTTCAACATTTTCCTATCCCCAGCGAACTGACTTGCCCCTAACACGAACC
GATGAATGAGTAATGCCATCTGGGGAAAAAAACAAACAAACTAGAATTCTATGAAGAAAC
AGAGAAGTTCCAGCAAACGCTAACAATTTTATAAAAAGGCCGAAACACTCCTGAAGTCAT
TGGTTTCAAAGGCTGCTTACAAAAGGAGTTATGGTTTAAGGAAGGGGCTCCTCTGAGTGT
AAAGGGGAGGAAGAGGAAGAGAGAAAAGGGAAGGGAAATGAGAGAGAGAGACGGGCTTTC
TCCTAAGCATGTGCTGTGTGGGTCTGTATCCTCTAAAAGAGATTTGCTCTCTTGGGAGGA
TATAGTGTAGAGACTGCTTGATAGAATCCACAAAAAATGTACTATGCTGATAATAAAACC
TTTCATATCTGTCAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGATACAAGGTTAGTACAGGTGGAGCTTGTAGAACAGTTCCTGGCACAGAGTCGGTCTC
AATAAATGTTGGCTGCTACCATCCTTAGGGGGGAACCAGAAGCAACTGGAGTGGTGGTGT
GGAGATCCTGGGGCTTCATCAGGCTGTTTTCCCTTCTAGTTGCATTGGACATGGGATTTG
CTCTCTACAGAAGGTTCTTTGTCCCTGCAAACGGGTCCCCGGTGTCTTTTGCAGCTCACA
TTGCAGGTGGATTTGCTGGAATGTCCATAGGCTACACCGTGTTCAGCTGCTTTGATAAGG
CACTCCTGAAAGATCCAAGGTTTTGGGTAGCAATTGCAGCTTATTTAGCTTGCGTCTTAT
TTGCTGTGTTTTTCAACATTTTCCTATCCCCAGCGAACTGACTTGCCCCTAACACGAACC
GATGAATGAGTAATGCCATCTGGGGAAAAAAACAAACAAACTAGAATTCTATGAAGAAAC
AGAGAAGTTCCAGCAAACGCTAACAATTTTATAAAAAGGCCGAAACACTCCTGAAGTCAT
TGGTTTCAAAGGCTGCTTACAAAAGGAGTTATGGTTTAAGGAAGGGGCTCCTCTGAGTGT
AAAGGGGAGGAAGAGGAAGAGAGAAAAGGGAAGGGAAATGAGAGAGAGAGACGGGCTTTC
TCCTAAGCATGTGCTGTGTGGGTCTGTATCCTCTAAAAGAGATTTGCTCTCTTGGGAGGA
TATAGTGTAGAGACTGCTTGATAGAATCCACAAAAAATGTACTATGCTGATAATAAAACC
TTTCATATCTGTCAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-224, gnl|bosTau2|chr3 (73384208-73383993)
               

               
               2-224, gnl|Hg17|chr1 (39022939-39022725)
               

               
               2-224, gnl|Mm7|chr4 (123271353-123271548)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-224, gnl|bosTau2|chr3 (73384208-73383993)
               

               
               2-224, gnl|Hg17|chr1 (39022939-39022725)
               

               
               2-224, gnl|Mm7|chr4 (123271353-123271548)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               hyp (0.142837)
               

               
               pty (0.142714)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)
               

               
               pty (0.142714)

	2-224, gnl\|bosTau2\|chr3 (73384208-73383993)
	2-224, gnl\|Hg17\|chr1 (39022939-39022725)
	2-224, gnl\|Mm7\|chr4 (123271353-123271548)