Ss1.1-rhyp15c_h12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAGGGCATGAAGAACAAGATCCTGATCTTGGGGTTGTTTGAGGAGACAGCCCTCGCCGC CTTCCTGTCCTACTGCCCTGGCATGGACGTGGCCCTTCGCATGTACCCTCTCAAGCCCAG CTGGTGGTTCTGTGCCTTCCCCTACAGTTTCCTCATCTTCGTCTACGACGAAATCCGCAA ACTCATCCTGCGCAGGAACCCCGGGGGTTGGGTGGAGAAGGAAACCTACTACTGACCTCA TCCCCACCACGTCTCCAGTCTACCCCCTGTCCCCCAAGCCCAGGACAGCCCAATCCAGTG GCCCCCTTATTTTGTATTCTTGGGGGCGGGGCCTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAGGGCATGAAGAACAAGATCCTGATCTTGGGGTTGTTTGAGGAGACAGCCCTCGCCGC CTTCCTGTCCTACTGCCCTGGCATGGACGTGGCCCTTCGCATGTACCCTCTCAAGCCCAG CTGGTGGTTCTGTGCCTTCCCCTACAGTTTCCTCATCTTCGTCTACGACGAAATCCGCAA ACTCATCCTGCGCAGGAACCCCGGGGGTTGGGTGGAGAAGGAAACCTACTACTGACCTCA TCCCCACCACGTCTCCAGTCTACCCCCTGTCCCCCAAGCCCAGGACAGCCCAATCCAGTG GCCCCCTTATTTTGTATTCTTGGGGGCGGGGCCTCT |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 13-115, gnl|bosTau2|chr18 (44712977-44712875) | |
| 13-115, gnl|canFam2|chr38 (25060672-25060742) | |
| 13-115, gnl|danRer3|chr19 (1727796-1727865) | |
| 13-115, gnl|echTel1|scaffold_235521 (16006-15921) | |
| 13-115, gnl|fr1|chrUn (100142419-100142337) | |
| 13-115, gnl|galGal2|chr1 (74369897-74369978) | |
| 13-115, gnl|hg17|chr19 (47163636-47163717) | |
| 13-115, gnl|Hg17|chr19 (47163755-47163653) | |
| 13-115, gnl|loxAfr1|scaffold_13579 (39655-39587) | |
| 13-115, gnl|mm7|chr7 (21768765-21768845) | |
| 13-115, gnl|Mm7|chr7 (21768883-21768781) | |
| 13-115, gnl|monDom2|scaffold_13 (61467087-61467161) | |
| 13-115, gnl|oryCun1|scaffold_203179 (131613-131694) | |
| 13-115, gnl|panTro1|chr20 (44043925-44044006) | |
| 13-115, gnl|rheMac2|chr19 (48273132-48273213) | |
| 13-115, gnl|rn3|chr1 (80360110-80360190) | |
| 13-115, gnl|tetNig1|chr3 (1571995-1572074) | |
| 13-115, gnl|xenTro1|scaffold_993 (297802-297871) | |
| 206-333, gnl|bosTau2|chr18 (44712429-44712303) | |
| 206-333, gnl|Hg17|chr19 (47162958-47162833) | |
| 206-333, gnl|Mm7|chr7 (21768064-21767941) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 13-115, gnl|bosTau2|chr18 (44712977-44712875) | |
| 13-115, gnl|canFam2|chr38 (25060672-25060742) | |
| 13-115, gnl|danRer3|chr19 (1727796-1727865) | |
| 13-115, gnl|echTel1|scaffold_235521 (16006-15921) | |
| 13-115, gnl|fr1|chrUn (100142419-100142337) | |
| 13-115, gnl|galGal2|chr1 (74369897-74369978) | |
| 13-115, gnl|hg17|chr19 (47163636-47163717) | |
| 13-115, gnl|Hg17|chr19 (47163755-47163653) | |
| 13-115, gnl|loxAfr1|scaffold_13579 (39655-39587) | |
| 13-115, gnl|mm7|chr7 (21768765-21768845) | |
| 13-115, gnl|Mm7|chr7 (21768883-21768781) | |
| 13-115, gnl|monDom2|scaffold_13 (61467087-61467161) | |
| 13-115, gnl|oryCun1|scaffold_203179 (131613-131694) | |
| 13-115, gnl|panTro1|chr20 (44043925-44044006) | |
| 13-115, gnl|rheMac2|chr19 (48273132-48273213) | |
| 13-115, gnl|rn3|chr1 (80360110-80360190) | |
| 13-115, gnl|tetNig1|chr3 (1571995-1572074) | |
| 13-115, gnl|xenTro1|scaffold_993 (297802-297871) | |
| 206-333, gnl|bosTau2|chr18 (44712429-44712303) | |
| 206-333, gnl|Hg17|chr19 (47162958-47162833) | |
| 206-333, gnl|Mm7|chr7 (21768064-21767941) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.45861) | |
| hyp (0.285673) | |
| ebs (0.236602) |