Non-Coding RNA Search

Ss1.1-rhyp16c_g8.5

Sequence:


               
               GGCCGCTGCAGATGCAGAACCCCCTATACCCAGTGACCGAGAGCTCGTATGGGGCCTACG
CGGTGCTGCTCCTGGCCCTGGTGCTGTTCGCCGTGGGCATCGTGGGGAACCTGTCGGTCA
TGTGCATCGTATGGCACAGCTACCACCTGAAGAGCGCCTGGAACTCCATCCTCGCCAGCC
TGGCCCTCTGGGACTTCCTGGTCGTCTTCTTCTGCCTCCCTGTCGTCGTCTTCCACGAGA
TCACCAAGCAGAGGCTGCTGGGCGATGCTTCTTGCCGGGCGGTGCCCTTCGTGGAGGTCT
CCTCTTTGGGCGTCACCACCTTCAGTCTCTGTGCCCTGGGCATCGACCGCTTCCACGTGG
CCACCAGCACCCTGCCCAAGGCGAGGCCCATCGAGCCGTGCCCATCCATCCTGGCCAAGC
TGGCGGTCATCTGGGTGGGCTCCATGACGCTGGCCGTGCCCGAGCTCCTGCTGTGGCAGC
TGGTGCAGGAGCCCAGCCCCACCGTGGGCACGGTGGACACGTGTGCCATGAAGCCCTCGG
CCCGCCTGCCCGAGTCCCTCTACTCGCTGGTCATGACCTACCAGAACGCACGCATGTGGT
GGTCCTTCGGCTGCTACTTCTGCCTGCCCATCCTCTTCACGGTCACCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCGCTGCAGATGCAGAACCCCCTATACCCAGTGACCGAGAGCTCGTATGGGGCCTACG
CGGTGCTGCTCCTGGCCCTGGTGCTGTTCGCCGTGGGCATCGTGGGGAACCTGTCGGTCA
TGTGCATCGTATGGCACAGCTACCACCTGAAGAGCGCCTGGAACTCCATCCTCGCCAGCC
TGGCCCTCTGGGACTTCCTGGTCGTCTTCTTCTGCCTCCCTGTCGTCGTCTTCCACGAGA
TCACCAAGCAGAGGCTGCTGGGCGATGCTTCTTGCCGGGCGGTGCCCTTCGTGGAGGTCT
CCTCTTTGGGCGTCACCACCTTCAGTCTCTGTGCCCTGGGCATCGACCGCTTCCACGTGG
CCACCAGCACCCTGCCCAAGGCGAGGCCCATCGAGCCGTGCCCATCCATCCTGGCCAAGC
TGGCGGTCATCTGGGTGGGCTCCATGACGCTGGCCGTGCCCGAGCTCCTGCTGTGGCAGC
TGGTGCAGGAGCCCAGCCCCACCGTGGGCACGGTGGACACGTGTGCCATGAAGCCCTCGG
CCCGCCTGCCCGAGTCCCTCTACTCGCTGGTCATGACCTACCAGAACGCACGCATGTGGT
GGTCCTTCGGCTGCTACTTCTGCCTGCCCATCCTCTTCACGGTCACCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61827663|ref|XP_610986.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61827663|ref|XP_610986.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               292-648, gnl|bosTau2|chr16 (46933550-46933906)
               

               
               292-648, gnl|Hg17|chr1 (198828522-198828877)
               

               
               292-648, gnl|Mm7|chr1 (135051490-135051129)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               292-648, gnl|bosTau2|chr16 (46933550-46933906)
               

               
               292-648, gnl|Hg17|chr1 (198828522-198828877)
               

               
               292-648, gnl|Mm7|chr1 (135051490-135051129)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hyp (0.285673)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.285673)

	292-648, gnl\|bosTau2\|chr16 (46933550-46933906)
	292-648, gnl\|Hg17\|chr1 (198828522-198828877)
	292-648, gnl\|Mm7\|chr1 (135051490-135051129)