Non-Coding RNA Search

Ss1.1-rhyp18c_g21.5

Sequence:


               
               GGTACGGTGGGAAGAGAAGGTGTACATCGCCCATCAGGGACCCATCGTCAGCACCGTCGG
CGACTTATGGCGCATGGTGTGGCAGGAGCACACGCCCATCATTGTCATGATCACAAACAT
CGAGGAGATGAACGAGAAGTGCACCGAGTATTGGCCGGAGGAGCAGGTGGTGTACGATGG
CGTCGAGATCACCGTGCGGAAAGTCATCCACACTGAGGATTACCGGCTACGACTCATCGC
CCTCAGGGTGAGGCCTGGGGCTGGGATGGGCCGTGCCCACATGGGAGGATGGGGGACTCC
ACGGCTAACAGGGCCCCAAAGGCCACGATAGCTGAAATGAAGGCGCGTGTTGTTCCCACG
ATTCACGGATAAGCAGGGGTGAGGGAGCGTCGGGTGAAAGGGCCAGAGGCAGGACCAGAC
CAGCTGCATGTCATGCTGTAGGGCCCTCTCCATCTACATTGTCATTCATAATGCCTTCCA
GCTCTGCTTCAAATGTCGCAAGTCTAGGACTGTCTGGGTAAGGGGGCTTCAGCAGCTTCC
AGCACTGTCCGAACTGAACTTCTTGAGACCCTACCTAGAAACAGTCCTTTACCTGGGATG
CTGGGCTTCTGGCGTGTAGTACCGAATGTGTCCACTAGAGGACAGCCGCTCCTTGCTGCA
TTGAGGCTGCACAGGGAGGCTGTCCTTACAGAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTACGGTGGGAAGAGAAGGTGTACATCGCCCATCAGGGACCCATCGTCAGCACCGTCGG
CGACTTATGGCGCATGGTGTGGCAGGAGCACACGCCCATCATTGTCATGATCACAAACAT
CGAGGAGATGAACGAGAAGTGCACCGAGTATTGGCCGGAGGAGCAGGTGGTGTACGATGG
CGTCGAGATCACCGTGCGGAAAGTCATCCACACTGAGGATTACCGGCTACGACTCATCGC
CCTCAGGGTGAGGCCTGGGGCTGGGATGGGCCGTGCCCACATGGGAGGATGGGGGACTCC
ACGGCTAACAGGGCCCCAAAGGCCACGATAGCTGAAATGAAGGCGCGTGTTGTTCCCACG
ATTCACGGATAAGCAGGGGTGAGGGAGCGTCGGGTGAAAGGGCCAGAGGCAGGACCAGAC
CAGCTGCATGTCATGCTGTAGGGCCCTCTCCATCTACATTGTCATTCATAATGCCTTCCA
GCTCTGCTTCAAATGTCGCAAGTCTAGGACTGTCTGGGTAAGGGGGCTTCAGCAGCTTCC
AGCACTGTCCGAACTGAACTTCTTGAGACCCTACCTAGAAACAGTCCTTTACCTGGGATG
CTGGGCTTCTGGCGTGTAGTACCGAATGTGTCCACTAGAGGACAGCCGCTCCTTGCTGCA
TTGAGGCTGCACAGGGAGGCTGTCCTTACAGAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               135-541, gnl|bosTau2|chr29 (18151453-18151865)
               

               
               135-541, gnl|Hg17|chr11 (18710827-18710383)
               

               
               135-541, gnl|Mm7|chr7 (43258156-43257775)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               135-541, gnl|bosTau2|chr29 (18151453-18151865)
               

               
               135-541, gnl|Hg17|chr11 (18710827-18710383)
               

               
               135-541, gnl|Mm7|chr7 (43258156-43257775)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hyp (0.142837)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)

	135-541, gnl\|bosTau2\|chr29 (18151453-18151865)
	135-541, gnl\|Hg17\|chr11 (18710827-18710383)
	135-541, gnl\|Mm7\|chr7 (43258156-43257775)