Ss1.1-rhyp20c_p7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGGATGAAGCCGAGCGCTGTATTAGCATCGCCCTCAAGGCCATCCAGAGCAACCAGCAT GACAGGGCGCTCCGCTTCCTGGAGAAGGCGCAGCGGCTGTACCCGACCCCGCGAGTTCGC GCCCTGATCGAGTCTCTCAGCCAGAAACCACAATCTGCCGGTGACCAACCCCAATCCACA GAAGCAACCCATGCGACCCATAGGAAAGCAGGCGGGGCCAGCTCTCCCTCGGCCAACGGT GAAGCCGGAGGAGGAGAGAGCACCAAAGGCTACACTGCAGAACAAGTAGCAGCCGTGAAA AGGGTCAAGCAATGTAAAGATTACTACGAGATCCTGGGGGTGAGCAGAGGGGCTTCTGAT GAGGACCTGAAGAAGGCCTACCGCAAACTGGCCCTCAAGTTCCACCCAGACAAGAACCAT GCGCCTGGCGCCACCGAAGCTTTCAAAGCCATCGGCACAGCGTATGCAGTACTCAGCAAC CCAGAGAAAAGGAAGCAGTATGACCAGTTCGGTGATGACAAGAGCCAGGCAGCCCGACAG GGCCATGGGCATGGGGACTTCCATCGTGGCTTTGAGGCCGACATCTCCCCTGAAGACCTC TTCAACATGTTTTTTGGAGGTGGCTTCCCATCTAGTAACGTCCATGTCTACAGCAACGGC CGCATGCGCTACGCATACCATCAAAGGCAGGACCGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGGATGAAGCCGAGCGCTGTATTAGCATCGCCCTCAAGGCCATCCAGAGCAACCAGCAT GACAGGGCGCTCCGCTTCCTGGAGAAGGCGCAGCGGCTGTACCCGACCCCGCGAGTTCGC GCCCTGATCGAGTCTCTCAGCCAGAAACCACAATCTGCCGGTGACCAACCCCAATCCACA GAAGCAACCCATGCGACCCATAGGAAAGCAGGCGGGGCCAGCTCTCCCTCGGCCAACGGT GAAGCCGGAGGAGGAGAGAGCACCAAAGGCTACACTGCAGAACAAGTAGCAGCCGTGAAA AGGGTCAAGCAATGTAAAGATTACTACGAGATCCTGGGGGTGAGCAGAGGGGCTTCTGAT GAGGACCTGAAGAAGGCCTACCGCAAACTGGCCCTCAAGTTCCACCCAGACAAGAACCAT GCGCCTGGCGCCACCGAAGCTTTCAAAGCCATCGGCACAGCGTATGCAGTACTCAGCAAC CCAGAGAAAAGGAAGCAGTATGACCAGTTCGGTGATGACAAGAGCCAGGCAGCCCGACAG GGCCATGGGCATGGGGACTTCCATCGTGGCTTTGAGGCCGACATCTCCCCTGAAGACCTC TTCAACATGTTTTTTGGAGGTGGCTTCCCATCTAGTAACGTCCATGTCTACAGCAACGGC CGCATGCGCTACGCATACCATCAAAGGCAGGACCGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 121-303, gnl|bosTau2|chr28 (21992503-21992324) | |
| 121-303, gnl|Hg17|chr10 (73774892-73774713) | |
| 121-303, gnl|Mm7|chr10 (59408222-59408404) | |
| 447-638, gnl|bosTau2|chr28 (21988971-21988780) | |
| 447-638, gnl|canFam2|chr4 (26181840-26182001) | |
| 447-638, gnl|danRer3|chr13 (31327354-31327202) | |
| 447-638, gnl|dasNov1|scaffold_15626 (3317-3161) | |
| 447-638, gnl|echTel1|scaffold_298803 (9677-9515) | |
| 447-638, gnl|fr1|chrUn (20227518-20227369) | |
| 447-638, gnl|galGal2|chr6 (10720839-10720681) | |
| 447-638, gnl|hg17|chr10 (73770738-73770899) | |
| 447-638, gnl|Hg17|chr10 (73770936-73770745) | |
| 447-638, gnl|loxAfr1|scaffold_31196 (4332-4170) | |
| 447-638, gnl|mm7|chr10 (59411058-59410904) | |
| 447-638, gnl|Mm7|chr10 (59410865-59411056) | |
| 447-638, gnl|monDom2|scaffold_14 (384467-384628) | |
| 447-638, gnl|oryCun1|scaffold_183793 (49008-48867) | |
| 447-638, gnl|panTro1|chr8 (74997166-74997330) | |
| 447-638, gnl|rheMac2|chr13 (65744230-65744382) | |
| 447-638, gnl|rn3|chr20 (27213729-27213575) | |
| 447-638, gnl|tetNig1|chr17 (5956966-5956826) | |
| 447-638, gnl|xenTro1|scaffold_785 (3401-3556) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 121-303, gnl|bosTau2|chr28 (21992503-21992324) | |
| 121-303, gnl|Hg17|chr10 (73774892-73774713) | |
| 121-303, gnl|Mm7|chr10 (59408222-59408404) | |
| 447-638, gnl|bosTau2|chr28 (21988971-21988780) | |
| 447-638, gnl|canFam2|chr4 (26181840-26182001) | |
| 447-638, gnl|danRer3|chr13 (31327354-31327202) | |
| 447-638, gnl|dasNov1|scaffold_15626 (3317-3161) | |
| 447-638, gnl|echTel1|scaffold_298803 (9677-9515) | |
| 447-638, gnl|fr1|chrUn (20227518-20227369) | |
| 447-638, gnl|galGal2|chr6 (10720839-10720681) | |
| 447-638, gnl|hg17|chr10 (73770738-73770899) | |
| 447-638, gnl|Hg17|chr10 (73770936-73770745) | |
| 447-638, gnl|loxAfr1|scaffold_31196 (4332-4170) | |
| 447-638, gnl|mm7|chr10 (59411058-59410904) | |
| 447-638, gnl|Mm7|chr10 (59410865-59411056) | |
| 447-638, gnl|monDom2|scaffold_14 (384467-384628) | |
| 447-638, gnl|oryCun1|scaffold_183793 (49008-48867) | |
| 447-638, gnl|panTro1|chr8 (74997166-74997330) | |
| 447-638, gnl|rheMac2|chr13 (65744230-65744382) | |
| 447-638, gnl|rn3|chr20 (27213729-27213575) | |
| 447-638, gnl|tetNig1|chr17 (5956966-5956826) | |
| 447-638, gnl|xenTro1|scaffold_785 (3401-3556) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| hea (0.204499) | |
| cki (0.165235) | |
| hyp (0.142837) | |
| cst (0.140036) | |
| cov (0.132153) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hea (0.204499) | |
| cki (0.165235) | |
| hyp (0.142837) | |
| cst (0.140036) | |
| cov (0.132153) |